Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0101 ATGGGTGATTCAGGATCTTCTAAGAGAATGTGGTGCTCAGTGCCAGAAAAGTTTCAGCTGCATGGAGCAATGTTGGCACTTCAATTTGGATATGCTGGCTTCCATGTTGTTTCAAGGGCTGCCCTTAACATGGGAGTTAGCAAGCTTGTTTTTCCAGTTTATAGAAACATCATTGCTTTGCTTCTCCTTCTTCCCTTTGCATACTTCTTGGAAAAGAAGGAGAGGCCAGCGATGACACTGAACTTCCTAGGCCAGTTCTTTGTTCTGGCACTTGTCGGGATTACAGCAAATCAAGGTTTCTATTTGCTTGGGTTGGAGAACACATCACCTACCTTCGCTTCAGCAATACAGAACTCTGTTCCAGCCATTACATTTCTCATGGCTGCCATACTCAGGATTGAACAAGTGAGACTAAACAGAAAAGATGGAATATCGAAAGTAGTTGGAACAATCCTATGTGTAATTGGTGCAACAGTGATCACACTCTACAAGGGTCCAACAATATACTCTCCAAAACCATCAACAACATTATTATTAACAACAAGATCAACATTAATGGATCCAGTTGATGAGGGCAAAAACTGGACCCTAGGGTGCATTTACCTAATTGGACATTGTTTGTCATGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTTCTTAAGAAATACCCTGCAAGGCTCTCTGTCACTTCATACACTTGCTTCTTTGGATTATTGCAATTCATTCTCATTGCTCTCATTTTTGAAAGAGATTATCAAGCTTGGCTTTTCCATTCTGGTGCTGAAGCCTTCACTATTCTATATGCGGGAGTGGTGGCATCAGGAATTGCATTCGCTGTACAAATATGGTGCATTGATAGAGGGGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTTGCAATCATGGCTTCCTTTGCTCTTGGAGAAGAGTTTTACTTGGGAGGGATCATTGGGGCAGTGCTAATTGTGGTTGGACTCTACCTAGTTTTGTGGGGTAAAAGTGAAGAGAAGAGGATTGCACAACTTGCAATTGCATCAAATAATATTAATGGAGATCATGGCATTATTAGGGCTTCAAGTCATGCCAAAGCATCATCACTCACTCAGCCACTAATCCTCCCTTCATCAACTGACAATCATGTTTAA 1161 0.4212 MGDSGSSKRMWCSVPEKFQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMTLNFLGQFFVLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGISKVVGTILCVIGATVITLYKGPTIYSPKPSTTLLLTTRSTLMDPVDEGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFILIALIFERDYQAWLFHSGAEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKRIAQLAIASNNINGDHGIIRASSHAKASSLTQPLILPSSTDNHV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0101 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 340 - -
Ahy16g0101 386 Pfam EamA-like transporter family 25 161 IPR000620 GO:0016020|GO:0016021
Ahy16g0101 386 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Ahy16g0101 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Ahy16g0101 386 PANTHER WAT1-RELATED PROTEIN 13 344 - -
Ahy16g0101 386 PANTHER WAT1-RELATED PROTEIN 13 344 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0101 Ahy-Chr16 991593 995776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0101 1 384 Nodulin-like Gene Family AT1G75500 75.578 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0101 - - adu:107493031 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0101 16 991593 995776 Ahy16g0101 16 991593 995776 ECH
Ahy16g0101 16 991593 995776 Ahy6g1244 6 18503868 18506946 hybridization
Ahy16g0101 16 991593 995776 Ahy17g2330 17 112395814 112398467 PCT
Ahy16g0101 16 991593 995776 Ahy8g0088 8 1491210 1493913 PCT
Ahy17g2330 17 112395814 112398467 Ahy16g0101 16 991593 995776 PCT
Ahy8g0088 8 1491210 1493913 Ahy16g0101 16 991593 995776 PCT