Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0095 ATGAACACGATTCGGTCTCGTTGGTTGTCGAGAAAAATGGCCGAAGAATTTGGCAAATCAGCAACCGCAACCACTTCCTCCACCGAAACACCGCGTTTTTGGCCTTCTCTCTTACGTTGGATTCCAACTTCCACCGACCACATCATCAATGCCGAGAAGCGCCTTCTCTCTCTCGTCAAGACTCCATATGTTCAAGAAAAGGTTAATATAGGCACTGGTCCACCAAATTCTAGAGTTAGATGGTTTGGTTCAGTGAGCAATGAGCCACGGTTTATTAACACCGTTACATTTGATAGTAAAGATGATGCTCCTACCCTTGTCATGGTTCATGGATATGCAGCTTCACAGGGTTTCTTCTTTCGCAATTTCGATGCTCTAGCTAATCGATTTAGGGTCATTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCTGACTTTACATGCAAAAGCACTGAAGAAACTGAAGCATGGTTCATCGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACCTGAGCAATTTTATATTGCTCGGGCATTCTTTTGGTGGTTATGTTGCTTCCAAGTATGCACTTAAGCACCCGGAGCATGTTAAGCACTTGATTTTGGTGGGACCTGCTGGTTTTTCACAAGAAACAGAGAGGATTACAAAGTTCTTATCAACATGGAAAGGATCAATTTTGAACCAGATATGGGAATCTAACTTTACACCTCAAACTATTATTAGAGGTTTAGGTCCTTGGGGTCCTGATATGGTGCGCAGGTATACAAGTGCTAGGTTTGTTACTCATACAACTGGTGAAATGCTGAATGAAACTGAAACTAGTTTGCTGACAGATTATGTTTACCATACTCTAGCGGCTAAAGCTAGCGGTGAGCTGTGCCTCAAACATATATTTTCGTTTGGAGCATTTGCTAGGATGCCCCTTCTTCACAGGGCTTCAGAGTGGAAGGTGCCCACCACTTTCATATATGGTATCCAAGATTGGATGAATTACGAAGGTGCCCAAGAAGCGCGCGACCAGATGAAGGTTCCATGCGAAATCATTAGAGTTCCCCAGGCTGGTCATTTTGTGTTCATTGACAACCCAAGTGGCTTCCATTCAGCTGTGTTCTATGCTTGTCGTAGGTTTCTTAGTCCGAATCCCGATAGCGAGTCCCTTCCGGACGCGTTAACCTCTGCATAG 1191 0.4416 MNTIRSRWLSRKMAEEFGKSATATTSSTETPRFWPSLLRWIPTSTDHIINAEKRLLSLVKTPYVQEKVNIGTGPPNSRVRWFGSVSNEPRFINTVTFDSKDDAPTLVMVHGYAASQGFFFRNFDALANRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVKHLILVGPAGFSQETERITKFLSTWKGSILNQIWESNFTPQTIIRGLGPWGPDMVRRYTSARFVTHTTGEMLNETETSLLTDYVYHTLAAKASGELCLKHIFSFGAFARMPLLHRASEWKVPTTFIYGIQDWMNYEGAQEARDQMKVPCEIIRVPQAGHFVFIDNPSGFHSAVFYACRRFLSPNPDSESLPDALTSA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0095 396 Gene3D alpha/beta hydrolase 90 377 IPR029058 -
Ahy16g0095 396 PRINTS Alpha/beta hydrolase fold signature 129 144 IPR000073 -
Ahy16g0095 396 PRINTS Alpha/beta hydrolase fold signature 192 205 IPR000073 -
Ahy16g0095 396 PRINTS Alpha/beta hydrolase fold signature 178 191 IPR000073 -
Ahy16g0095 396 Pfam alpha/beta hydrolase fold 104 365 IPR000073 -
Ahy16g0095 396 PANTHER RE40534P-RELATED 7 389 - -
Ahy16g0095 396 PRINTS Epoxide hydrolase signature 353 375 IPR000639 GO:0003824
Ahy16g0095 396 PRINTS Epoxide hydrolase signature 129 144 IPR000639 GO:0003824
Ahy16g0095 396 PRINTS Epoxide hydrolase signature 192 205 IPR000639 GO:0003824
Ahy16g0095 396 PRINTS Epoxide hydrolase signature 178 191 IPR000639 GO:0003824
Ahy16g0095 396 PRINTS Epoxide hydrolase signature 320 336 IPR000639 GO:0003824
Ahy16g0095 396 SUPERFAMILY alpha/beta-Hydrolases 93 372 IPR029058 -
Ahy16g0095 396 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 7 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0095 Ahy-Chr16 902622 906593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0095 81 286 Acyl Lipid Metabolism Gene Families AT1G64670 26.549 2.84e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0095 - - gmx:100789925 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0095 16 902622 906593 Ahy6g1252 6 18705872 18709896 hybridization
Ahy16g0095 16 902622 906593 Ahy17g2315 17 111512347 111515632 PCT
Ahy16g0095 16 902622 906593 Ahy8g0101 8 1868198 1871609 PCT
Ahy17g2315 17 111512347 111515632 Ahy16g0095 16 902622 906593 PCT
Ahy8g0101 8 1868198 1871609 Ahy16g0095 16 902622 906593 PCT