Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0081 ATGGCTTTAAGACCTTCATTTTGGACTAATAACTCATGGCAACCAGTTGCTGCGCCCGTGCGAACCTACACTAAGGTGCAAAAGGCAGGATCTGTAGGAAGATCAATTGATGTCACAACTTTCAAGAACTACGAAGAGCTGATCCGCGCGATTGAATGCATGTTCGGACTAGATGGTCTGCTGAATGACACCAAAGGTTCCGGCTGGAAACTGGTGTATGTGGATTATGAGAGTGATGTTCTTCTTGTTGGGGATGATCCTTGGGAGGAATTTGTCGGCTGCGTTCGATGCATCAGAATCTTATCGCCTTCAGAAGTTCAACAGATGAGTGAAGAGGGAATGAAGCTTCTCAACAGTGGAGCCTTGCAAGGGATCAATGTTTGA 384 0.4609 MALRPSFWTNNSWQPVAAPVRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGINV* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0081 127 Pfam AUX/IAA family 20 108 IPR033389 -
Ahy16g0081 127 Gene3D - 17 110 - -
Ahy16g0081 127 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 125 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy16g0081 127 PANTHER AUXIN RESPONSE FACTOR 5 7 125 - -
Ahy16g0081 127 SUPERFAMILY CAD & PB1 domains 22 100 - -
Ahy16g0081 127 ProSiteProfiles PB1 domain profile. 21 105 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0081 Ahy-Chr16 787559 790985 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0081 11 126 B3 DNA Binding Superfamily AT1G19850 82.051 1.80e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Ahy16g0081 AUX_IAA 1.50E-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0081 K14486 - ahf:112754458 262.692