Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0079 ATGTTTAAAAACGTAGAGAGTGGTGCAGCATTAATGGCTTCCTTAGAAGAAAAGGTTAAAACTTGTGGTGTTGGTGTTGTTGGGGGTCAAACTCTAGTTGCTGAGATGAAGCTCCTCAAGGAAATGCAAGAGCACTCTGGGGTGAGAAAGACTTTGAATTCAGAACTGTGGCATGCTTGTGCTGGCCCTCTTGTCTCTTTGCCTCAAGTGGGAAGTCTTGTTTATTACTTTCCCCAGGGACATAGTGAGCAGGTGGCAGCTTCCACCAGAAGAACAGCAACATCTCAGATTCCAAACTATCCAAACCTTCCATCTCAGTTGCTCTGCCAAGTTCAAAATGTCACACTTCATGCAGACAAAGATACAGATGAAATCTATGCTCAAATGAGTCTCCAGCCCTTGAATTCGGAGAAAGATGTGTTTCCTATATCTGATTTTGGCCTAAAGCACAGCAAGCATCCAACTGAGTTTTTCTGCAAAACTTTGACTGCAAGTGACACCAGCACACACGGCGGTTTCTCAGTTCCACGGAGGGCGGCAGAAAAGCTCTTTCCTCCACTGGACTACACAATTCAGCCTCCAACACAAGAACTAGTTGTCCGTGATTTGCATGACAATACTTGGACATTTCGACATATATACCGGGGTCAGCCCAAGAGACACCTTTTAACAACAGGATGGAGTTTATTTGTCGGATCAAAAAGGCTTAGAGCAGGGGATTCTGTTCTATTTATCAGGGATGAGAAATCGCAACTGCGAGTTGGTGTTAGGCGTGTTAATCGCCAACAAACAACATTGCCATCATCAGTTCTTTCTGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCACGCGGCTTCTAACCGAATTCCTTTCACTATTTTCTATAATCCAAGGGCATGCCCTTCAGAATTTGTTATTCCACTTGCTAAGTACCGAAAATCTGTATATGGGACACAACTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAAGAATCCGGTAAGCGCAGGTATATGGGTACAATAGTTGGTATCAGTGACTTGGATCCTTTGAGATGGCCTGGTTCTAAGTGGCGAAATATTCAGGTGGAGTGGGATGAACCAGGATGTGGTGACAAGCAGAATAGAGTTAGTGTATGGGAAATTGAGACTCCTGAAAGCCTTTTTATATTTCCTTCTTTAACTTCGAGTCTAAAACGGCCATTACAGTCTGGATTTTTGGAAAACGACTGGGGAGCTTTGATACGAAGACCATATATAAGAGTTCCTGAAAACGGTGCAACGGAGCTGGCGAATTCAATGCCAAATATCTACTCTGAACACCTGATGAAAATGCTTTTGAAGCCACAACTTATTAACAATAATGGAGCCATGGCCATGCAACAAGAATCTGTTGCTATGAGAGGTACTCTACAAGATGCAAAGACCACACAGGCACCAGAGAACCATAAAGTTAATCTTGCTAGTACAGAGAACCTGCCACTGAAAAATTTGTATTCTCAATCTGTTCCTGACCAAGCTAATGTCGTGAACTTACATTCTCAAGCGAAAAATGATAACCATATGTCTTCTGGAACAGTTATTGATAAGCCGAAGCTCGAACCTGAGGTATTAAATGATCAAATGTATGAGATTCCATCTGCAGGAACAGGAACCAACATTGAAAAAGTGGCCTCAAATCCTGCTAACTCTCAAAGTGTTGCGAACCAATTGGCATTCCTTAATCAAAACCAGAGTCAGTCACTTGCGCAATCCGGTTCATGGCCTATACAACCTCAGTTAGAATCATCGGTATCCCATCCTCAACTTGTTGACATGCCTCAAGGTGATTCTGCAATTGCAAACAGCATGCTTCCTCAGCTAGACATTGATGAATGGATGGTGTATTCTTCTAACCAAACTTTTGCTAACCAAAACCGATCAACTGGGCCGGTATCAGATTTTCAAGAGCATTCTGCCGCACTTCAACCTCAAGTAGTGAATCCTCCCATGCCAATGAACCAAGAAGTGTGGGATCAATATGTCAAGAATTTTAAGCTTTTGTCTCAAGTAGACCAGCTGACATCTGTCTGTCAGCCGGGGATGTACAGCCTCAACGGTATATCGAGTTCAAACAATTTGAGGGATCTTTCAGCAGAGAGCAATAATCAAAGTGAAATTTGTGTCGATGTTAGTAATAGTGTAAATACAACCATGGTTGATCCTTCAACTTCAAGCACCATTTTGGATGAGTATTGCACTCTGAAGGAGAGGGATTTCCAGAATCCACAAGATTGCATCGTCGGCAACTTAAGTTCTAGCCAGGATGTCCAGTCTCAGATAACCTCTGCAAGTCTAACTGAGTCACATGCCTTTCCTCTGCAAGACAACTCAGGTGGTACATCTTCAAGTCATGTTGATTTTGATGAAAGCAGCTTTCTGCAGAATAACTCATGGCAACCAGTTGCTGCGCCCGTGCGAACCTACACTAAGGTGCAAAAGGCAGGATCTGTAGGAAGATCAATTGATGTCACAACTTTCAAGAACTACGAAGAGCTGATCCGCGCGATTGAATGCATGTTTGGACTAGATGGTCTGCTGAATGACACCAAAGGTTCCGGCTGGAAACTGGTGTATGTGGATTATGAGAGTGATGTTCTTCTTGTTGGGGATGATCCTTGGGAGGAATTTGTCGGCTGCGTTCGATGCATCAGAATCTTATCGCCTTCAGAAGTTCAACAGATGAGTGAAGAGGGAATGAAGCTTCTCAACAGTGGAGCCTTGCAAGGGATCAATGTTTGA 2796 0.4345 MFKNVESGAALMASLEEKVKTCGVGVVGGQTLVAEMKLLKEMQEHSGVRKTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQVQNVTLHADKDTDEIYAQMSLQPLNSEKDVFPISDFGLKHSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAASNRIPFTIFYNPRACPSEFVIPLAKYRKSVYGTQLSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSSLKRPLQSGFLENDWGALIRRPYIRVPENGATELANSMPNIYSEHLMKMLLKPQLINNNGAMAMQQESVAMRGTLQDAKTTQAPENHKVNLASTENLPLKNLYSQSVPDQANVVNLHSQAKNDNHMSSGTVIDKPKLEPEVLNDQMYEIPSAGTGTNIEKVASNPANSQSVANQLAFLNQNQSQSLAQSGSWPIQPQLESSVSHPQLVDMPQGDSAIANSMLPQLDIDEWMVYSSNQTFANQNRSTGPVSDFQEHSAALQPQVVNPPMPMNQEVWDQYVKNFKLLSQVDQLTSVCQPGMYSLNGISSSNNLRDLSAESNNQSEICVDVSNSVNTTMVDPSTSSTILDEYCTLKERDFQNPQDCIVGNLSSSQDVQSQITSASLTESHAFPLQDNSGGTSSSHVDFDESSFLQNNSWQPVAAPVRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGINV* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0079 931 CDD B3_DNA 157 258 IPR003340 GO:0003677
Ahy16g0079 931 Gene3D - 155 259 IPR015300 -
Ahy16g0079 931 ProSiteProfiles PB1 domain profile. 825 909 IPR000270 GO:0005515
Ahy16g0079 931 Gene3D - 821 914 - -
Ahy16g0079 931 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
Ahy16g0079 931 SUPERFAMILY DNA-binding pseudobarrel domain 146 287 IPR015300 -
Ahy16g0079 931 Gene3D - 322 394 - -
Ahy16g0079 931 Pfam AUX/IAA family 822 912 IPR033389 -
Ahy16g0079 931 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
Ahy16g0079 931 SMART B3_2 158 260 IPR003340 GO:0003677
Ahy16g0079 931 PANTHER AUXIN RESPONSE FACTOR 5 38 929 - -
Ahy16g0079 931 SUPERFAMILY CAD & PB1 domains 829 904 - -
Ahy16g0079 931 Pfam Auxin response factor 284 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy16g0079 931 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 38 929 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0079 Ahy-Chr16 768426 774201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0079 31 930 B3 DNA Binding Superfamily AT1G19850 60.884 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy16g0079 AUX_IAA 4.80E-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0079 K14486 - gmx:100790289 1521.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0079 16 768426 774201 Ahy16g0079 16 768426 774201 ECH