Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0071 ATGGGAGTTCCGGCGTTTTACCGGTGGCTGGCGGAGAAGTATCCGATGGTGGTTGTCGATGCCGTCGAGGAGGAACCGGTGGTGATCGACGGAATCGCGATTCCAGTGGATACGAGCAAGAAGAACCCTAACAACCTTGAATACGATAACCTCTACCTCGATATGAACGGCATCATTCACCCTTGTTTTCACCCCGAGGATAGGCCATCTCCGACTTCATTTGATGAGGTGTTCCAGTGCATGTTTGACTACATTGATAGGCTGTTTGTGATTGTCCGGCCTAGGAAGCTGCTCTACATGGCTATTGATGGTGTGGCACCGAGGGCTAAAATGAATCAGCAACGGTCTAGGCGGTTCAGAGCAGCAAAAGATGCAGCTGACGCAGCTGCTGAAGAAACTAGGTTAAGAGAGGAATTTGAGAGGGAGGGCAGAAAGCTTCCTCCCAAAGAAGAGTCCCAGACTTTTGATTCAAATGTCATTACACCTGGAACCGAATTTATGGCTGTTTTATCAATTGCGCTCCAGTACTATGTTCATCTTAGGTTAAACAATGACCCTGGTTGGCAGAATATTAAGGTTATTCTTTCAGATGCAAATGTTCCTGGTGAGGGGGAGCATAAGATTATGTCCTATATACGGTTACAGAGGAATCTTGAAGGTTATGATCCAAATACAAGACATTGCCTGTATGGTTTGGATGCTGATTTGATTATGTTGGCTTTAGCTACCCATGAAGTGCACTTTTCAATTCTAAGAGAGGTTGTATTTACTCCCGGTCAAGACAAATGTTTCCTGTGTGGTCAGATGGGTCACATGGCTGCTGACTGTGAAGGAAAGGCAAAAAGAAAGGCCGGAGAATTTGATGAAAAAGGAGATCCTATTGTGGTTAAAAAGTCTTACCAGTTTCTAAACATTTGGACATTGAGGGAATATCTGGAGTATGAGATGAAAATTCCGAATCCTTCATTTGAGATTGATTTTGAGCGAATTGTTGATGACTTTATCTTCATGTGCTTTTTTGTTGGCAATGATTTCCTTCCCCATATGCCTACACTAGAAATTAGAGAGGGTGCAATTAACTTGCTTCTAGCAGTATACAAGAAGGAGTTCAATGCACTAGGTGGTTATTTAACCAAAGGAAGTAAGCCAAATTTGGATAGAGTGGAGCACTTTATTCAGGCTGTTGGAGCTTATGAAGATAGAATTTTCCAGAAAAGAGCTCGATTGCATCAGCGACAAGCAGAAAGAATTAAGCGGGATAAGGCCCATTCAAGGAGGGGAGATGATGCCCAGCCTCAATTTCAACCAGAGTCTCTAGTTGCAGTTTCACGATTTCATGGTTCTCGTCTTGCTTCAGCTCCAACGCCTTCACCATTTCAACAATCTGGGCACCATGATCCCAGCTCATCTGGGAAAGACCATAGGAGTGCATCTGAGGCGCTCCCAAAAGTTGCTAAGCTATCTTCTGGGGCAACTGTTGCTGCTGCTATTGTTGAAGCTGAGAATAGTCTTGAAATAGATTTTCAAGATAACAAAGACGAATTGAAAGCAAAACTAAAGGAGGTACTTCGTGAGAAATCTGATGTATTCAATTCACAAAATGCCGGAGAGGATAAGATCAAATTGGGAGAACCAGGCTGGAAAGAGAGATATTATGATGAGAAGTTCTCGGCTAAAACTCCTGAGGAACTTGAAATGATACGGAAAGATGTTGTTTTGAAATACACTGAAGGCTTGTGTTGGGTGATGCACTATTATTACGAAGGTGTTTGTTCTTGGCAATGGTTTTATCCTTATCATTATGCCCCGTTTGCATCTGATCTCAAGGACCTTGGGAGTCTTGATATTAACTTTTCACTGGGTACCCCATTCAAACCTTTTGACCAACTTCTTGGGGTTTTCCCTGCTGCGAGCTCGCATGCACTTCCTCAACCATATAGGAAACTTATGACAGAAGCTGACTCACCAATCATTGATTTTTATCCAGTTGACTTTGAAGTGGACATGAATGGCAAACGCTATTCTTGGCAGGGTATTGCAAAGTTGCCTTTTATTGATGAAGCACGTCTTCTTGCAGAAGTTACAAAAGTTGAAAATTTGTTAACACCAGAGGAGAAGAGGCGAAATGCTATCATGTTTGACTTGCTTTTCGTAAATTCCTGTCATCCACTTTCTGCATGCATAAGTACACTTGACAACAAATGCAGAAACATGTCCGACAGTGAGCGTGTTGATGTCAAAGAACAAATCAATCCCAAAGAAAGTGGCGGAATGAATGGTTTTATATCCTTATGTGGTGGAGAGCCTTGCCCTCCTATCTTTAGGTCTCCTGTTGAAGGCATGGAAGATATTATGGACAACCATGTCATATGTGCCATATACAGACTCCCAGATGCGCATAAACACATTACTCGACCACCACCAGGAGTTAAATTTCCAAAGAAGACTGTGACTCTTGGGGATATGAAACCTGAACCAGTATTATGGCATGAAGATTCTGGTGGGAGACGGGGTGGTGGGGATAATGGGAGGAGAAACCCTCCAGGATCTATTTCTGGTCGGGAGCTTGGAGATGCAGCACACAGATTAGTAACGAATTCCTTACAAGCAAAAGGTGGCAACAATGGATATCGCTATCCAATTAATGGACCACCTCCATCTTACGCACCACCAATGGCTCACCAAAGATTGCCTCCCTACAATTATGAATCACACCCAGGATACGGTGCCATGCCACCTTCTGTGATGCCTCCACTCCAGGGCCAGCAGCCTTATCGACCTTATGCTACTGTCCCTACCCAACAGTATGGTTATAATCAGCCATATCAGCTGCCTCCCCCGGCAATGTACAATCATCATCATCAACCACCTGGTTCTTATGAAAGAAATAACCACCAACACCCCCCACGATCAAACCATTATGGAAGAAATCACGGTAGTGGGGGAAGTGGGAGGGATGGATACCAACCATCAGGTAATAATCACAATGCCAGGTATCCAAATGCGTCGCAAGGGGCATTTGGTAGTCATCATCAAGATGTTCGACATCATGGCCAAGGTTACCAACCATCTAGACATCACCAGAATTGGGCTCCAAGGAATGACGAAAATGGCCCCAGGGATTATGGGCACCAACATTCGGCCAATCAATTTTCTTCTTTGGACAGAAGGGGAAACAGGAAGCCAATGCCACCACCTGGTTATAGTCGCAGATAA 3216 0.4403 MGVPAFYRWLAEKYPMVVVDAVEEEPVVIDGIAIPVDTSKKNPNNLEYDNLYLDMNGIIHPCFHPEDRPSPTSFDEVFQCMFDYIDRLFVIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEETRLREEFEREGRKLPPKEESQTFDSNVITPGTEFMAVLSIALQYYVHLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLEGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQDKCFLCGQMGHMAADCEGKAKRKAGEFDEKGDPIVVKKSYQFLNIWTLREYLEYEMKIPNPSFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLLAVYKKEFNALGGYLTKGSKPNLDRVEHFIQAVGAYEDRIFQKRARLHQRQAERIKRDKAHSRRGDDAQPQFQPESLVAVSRFHGSRLASAPTPSPFQQSGHHDPSSSGKDHRSASEALPKVAKLSSGATVAAAIVEAENSLEIDFQDNKDELKAKLKEVLREKSDVFNSQNAGEDKIKLGEPGWKERYYDEKFSAKTPEELEMIRKDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGSLDINFSLGTPFKPFDQLLGVFPAASSHALPQPYRKLMTEADSPIIDFYPVDFEVDMNGKRYSWQGIAKLPFIDEARLLAEVTKVENLLTPEEKRRNAIMFDLLFVNSCHPLSACISTLDNKCRNMSDSERVDVKEQINPKESGGMNGFISLCGGEPCPPIFRSPVEGMEDIMDNHVICAIYRLPDAHKHITRPPPGVKFPKKTVTLGDMKPEPVLWHEDSGGRRGGGDNGRRNPPGSISGRELGDAAHRLVTNSLQAKGGNNGYRYPINGPPPSYAPPMAHQRLPPYNYESHPGYGAMPPSVMPPLQGQQPYRPYATVPTQQYGYNQPYQLPPPAMYNHHHQPPGSYERNNHQHPPRSNHYGRNHGSGGSGRDGYQPSGNNHNARYPNASQGAFGSHHQDVRHHGQGYQPSRHHQNWAPRNDENGPRDYGHQHSANQFSSLDRRGNRKPMPPPGYSRR* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 825 839 - -
Ahy16g0071 1071 Coils Coil 122 142 - -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 805 856 - -
Ahy16g0071 1071 Pfam Xrn1 helical domain 325 822 IPR041412 -
Ahy16g0071 1071 SMART c2hcfinal6 262 278 IPR001878 GO:0003676|GO:0008270
Ahy16g0071 1071 PANTHER 5'-3' EXORIBONUCLEASE 1 1030 - -
Ahy16g0071 1071 CDD PIN_XRN1-2-like 51 312 - -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 130 155 - -
Ahy16g0071 1071 Pfam Zinc knuckle 262 276 IPR001878 GO:0003676|GO:0008270
Ahy16g0071 1071 SUPERFAMILY Retrovirus zinc finger-like domains 258 283 IPR036875 GO:0003676|GO:0008270
Ahy16g0071 1071 Coils Coil 505 525 - -
Ahy16g0071 1071 Pfam XRN 5'-3' exonuclease N-terminus 1 253 IPR004859 GO:0003676|GO:0004527
Ahy16g0071 1071 Gene3D - 1 134 - -
Ahy16g0071 1071 Gene3D - 146 387 - -
Ahy16g0071 1071 PANTHER 5'->3' EXORIBONUCLEASE 1 1030 IPR027073 -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 984 1008 - -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 936 1071 - -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 413 437 - -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 449 483 - -
Ahy16g0071 1071 PIRSF Exonuclease_Xrn2 1 1039 IPR017151 GO:0004534|GO:0005634|GO:0006139
Ahy16g0071 1071 Gene3D - 601 711 - -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 868 905 - -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 130 151 - -
Ahy16g0071 1071 MobiDBLite consensus disorder prediction 413 430 - -
Ahy16g0071 1071 ProSiteProfiles Zinc finger CCHC-type profile. 262 276 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0071 Ahy-Chr16 618853 626705 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0071 - K12619 gmx:100785683 1809.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0071 16 618853 626705 Ahy16g0071 16 618853 626705 ECH
Ahy16g0071 16 618853 626705 Ahy6g1268 6 19159169 19167020 hybridization