Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy16g0070 | ATGGAGATTATAGAAGATCAACAAGAAGAAGCACCAATGAAATCATCAACAAGGTTCAAGCGTATCTGTGTGTTCTGTGGCACAAGCCCTGGCAAGAACCCAAGCTACCAAATTGCTGCTATTCAACTTGGAAAACAATTGGTGGAGAGGAATATAGACTTGGTATATGGAGGAGGAAGCATAGGGTTAATGGGTCTCATCTCACAAGTTGTCTTTGATGGTGGACGCCACGTGTTAGGGGTCATCCCTAAGACTCTAATGCCGAGAGAGATCACAGGAGAGACTGTGGGAGAAGTGAGGGCAGTTTCGGGAATGCACCAACGTAAGGCTGAAATGGTTCGACAAGCTGATGCATTTATTGCTTTGCCAGGTGGTTATGGAACCTTGGAAGAACTGTTGGAGGTCATCACCTGGGCTCAATTAGGAATTCATGATAAACCTGTAGGGTTGTTGAACGTGGATGGATACTATAACTCATTGTTGTCATTCATGGACAAAGCTGTTGATGAAGGTTTCATAACACCAGCTGCCCGTCACATTATTGTGGCTGCCCAAACTGCCCAAGAACTTATGTGTAAGCTTGAAGAATACGTTCCAAAGCACTGTGGCGTGGCCCCAAAGCAAAGCTGGGAGATGGACCAACACTTACTAAATACTTAA | 660 | 0.45 | MEIIEDQQEEAPMKSSTRFKRICVFCGTSPGKNPSYQIAAIQLGKQLVERNIDLVYGGGSIGLMGLISQVVFDGGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQRKAEMVRQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFMDKAVDEGFITPAARHIIVAAQTAQELMCKLEEYVPKHCGVAPKQSWEMDQHLLNT* | 220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy16g0070 | 219 | PANTHER | LOG FAMILY PROTEIN YJL055W | 12 | 214 | - | - | |
| Ahy16g0070 | 219 | PANTHER | CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE | 12 | 214 | - | - | |
| Ahy16g0070 | 219 | SUPERFAMILY | MCP/YpsA-like | 18 | 197 | - | - | |
| Ahy16g0070 | 219 | TIGRFAM | TIGR00730: TIGR00730 family protein | 20 | 197 | IPR005269 | GO:0009691|GO:0016787 | |
| Ahy16g0070 | 219 | Pfam | Possible lysine decarboxylase | 64 | 193 | IPR031100 | - | |
| Ahy16g0070 | 219 | Gene3D | - | 8 | 196 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy16g0070 | Ahy-Chr16 | 608210 | 611787 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy16g0070 | K22522 | - | gmx:100814612 | 391.349 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy16g0070 | 16 | 608210 | 611787 | Ahy16g0070 | 16 | 608210 | 611787 | ECH | |
| Ahy16g0070 | 16 | 608210 | 611787 | Ahy6g1269 | 6 | 19171594 | 19175555 | hybridization | |
| Ahy16g0070 | 16 | 608210 | 611787 | Ahy17g2286 | 17 | 110480753 | 110482903 | PCT | |
| Ahy16g0070 | 16 | 608210 | 611787 | Ahy8g0119 | 8 | 2249677 | 2251945 | PCT | |
| Ahy17g2286 | 17 | 110480753 | 110482903 | Ahy16g0070 | 16 | 608210 | 611787 | PCT | |
| Ahy8g0119 | 8 | 2249677 | 2251945 | Ahy16g0070 | 16 | 608210 | 611787 | PCT |