Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0069 ATGGCACTAGCTCCTTCTCCTTCTTCTGTTTGTGTCCCTGGGTGCCGCTTGCATTTGCATTCTTCTTTCCTCTCTTACCCTCTCAACTCCTTCTCTCCCTCAGCAGCTTCAATAAGAATTCAAGCAAAACCCATTAGAGCTGAACTTGATCAAAACACGGTAGTGGCTATAACGGTTGGTGTTGTGAGTGTTGCAGTGGGGATTGGTATTCCGGTCTTCTATGAGTCTCAAATTGATAATGCTGCTAAGAGAGAAAACACGCAAGCCTGCTTCCCATGCAATGGCTCTGGTGCTCAGAAATGTAGATTTTGTTTGGGAACAGGAAATGTTACAGTTGAACTTGGTGGCGATCAGAAGGAGGTCTCGCGCTGCATAAATTGCGACGGTGCTGGTTCACTCACATGCACCACTTGTCAAGGATCCGGAATCCAACCTCGTTACCTTGACCGGAGGGAATTCAAAGATGATGACTGA 474 0.4684 MALAPSPSSVCVPGCRLHLHSSFLSYPLNSFSPSAASIRIQAKPIRAELDQNTVVAITVGVVSVAVGIGIPVFYESQIDNAAKRENTQACFPCNGSGAQKCRFCLGTGNVTVELGGDQKEVSRCINCDGAGSLTCTTCQGSGIQPRYLDRREFKDDD* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0069 157 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 39 156 - -
Ahy16g0069 157 Pfam Family of unknown function (DUF5351) 101 132 IPR035272 -
Ahy16g0069 157 PANTHER PROTEIN DISULFIDE-ISOMERASE LQY1, CHLOROPLASTIC 39 156 - -
Ahy16g0069 157 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 85 144 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0069 Ahy-Chr16 604782 606626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0069 K22520 - gmx:100305711 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0069 16 604782 606626 Ahy16g0069 16 604782 606626 ECH
Ahy16g0069 16 604782 606626 Ahy6g1270 6 19177938 19179156 hybridization