Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0062 ATGATCCGATTCATTCTGCTGCAGAACAGGCAGGGGAAAACCCGTTTGGCGAAATACTATGTCCCTCTCGAGGATTCCGAGAAGCACAAGGTCGAATACGAGGTTCATCGCCTCGTTGTTAATCGAGACCCCAAATACACTAACTTCGTTGAGTTTAGGACTCACAAGGTAATATATAGGAGATATGCTGGCTTGTTCTTCTCTCTATGTGTTGACATTACTGATAATGAGCTTGCTTACTTGGAGTGCATCCATCTATTTGTGGAGATTTTGGATCACTTCTTTAGCAATGTATATCTTATACTTGATGAATTCATTCTAGCGGGTGAATTGCAAGAAACTAGTAAAAAGGCTATCATAGAGAGAATGGGGGAACTAGAAAAACTTGAGTAA 393 0.4071 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKYTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVYLILDEFILAGELQETSKKAIIERMGELEKLE* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0062 130 PANTHER AP COMPLEX SUBUNIT SIGMA 2 130 - -
Ahy16g0062 130 SUPERFAMILY SNARE-like 1 124 IPR011012 -
Ahy16g0062 130 PIRSF AP_complex_sigma 1 130 IPR016635 GO:0015031
Ahy16g0062 130 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 130 IPR016635 GO:0015031
Ahy16g0062 130 CDD AP2_sigma 1 129 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
Ahy16g0062 130 Pfam Clathrin adaptor complex small chain 1 129 IPR022775 -
Ahy16g0062 130 Gene3D - 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0062 Ahy-Chr16 557351 559713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0062 K11827 - mnt:21399120 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0062 16 557351 559713 Ahy16g0062 16 557351 559713 ECH
Ahy16g0062 16 557351 559713 Ahy6g1277 6 19307793 19310214 hybridization