Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0040 ATGATGACACACACTTGGTCCCTTTGTTGTCCTACTCCAACGTTAACAAGAACAACGCCCGGTAGATCAGAGAAAGAATGTGATGGGCAAGAGAGCTTGTGTGTGAAGGCAAACGTGAATGAAGAATACTTAGAAGCATTTAGAACTAAGTCATACATAGAAATATGCAACAAAGCACAAGGCCAACTTGGGAGAACAATAAGAAGATCACCACTATTGTCTTCAAATAACAATTCTCCATCAACAAATAATTCATCTTCTTCTACCCTTCCATTCTGCAAGCACCTCACAGAGTTCTTGCTTGATCCAAGGCAAGAGAACATAACAAGCATGGCTGAGACCACCAAAGTTCACCATCTCCTTGTGAACTACTTTGAATCCAGCTTAGAAGCCTGCCATTGTTGCGACCAAATCCTCCAAGGGCTCCACTCCATGAGACTCTCTTATGGAAGAATAAAGAGGGTTGTTAAGATAAGCAAAATGGTTCTTGATGAAGACTGCAACAACAATGGAGACCAACAACAACAAATCCAAAAGGATGTTATCTATAGAGAGCTTGCTTCTTTTGCATTGCAGAACAACCCTTTGTCCATTCAATTCCACGACATTCATCAAAGGTTCATGGAGCTGTTGCATAGGCTGAGATCAAAGAGAGTGAAGATTCAGAGGAAACTAACATGGAAGAGCATATGCAAGAAGGTGGCAGGGATTGGTCTTGTGACAGCACACAGTGCTATAGTTGTTGCATTATTGGTGCTTTGTTTTCACAGCATTGTGGGGTTGGTGGCTGCACCAGGAATTCTAGGGGGATTTTTTGGTTGGTTGATAAAGAGAATATTCAAAAGGAAGAATAGTAAGAATGGAAGAATTAGGAGAAGTTACTGTGAGAGGCTGTGTGAGCAACTAGATGTGGCAGCAAAAGGGATATATATAGTGATAAATGAGTTGAACACAGTGAGTAGGATGGTGATGAGGCTGCATGATGAGGTGGAGCATAGGAGGGTCATTGCACAAGTGTGTGTCAGGAACTATGGAAAGTCTGAGATACTTAGGCAGGTTCTTAGGGACTTGAATGACAATCAATCAAGCTTTTTGGATCAGTTGGAGGAGCTTGAGAACCATATTTACTTTTGCTTTCTCACCATTAACAGATCAAGGAGCCTCCTTCTCCAAGAAATTACCCAGGATTTATAA 1194 0.4154 MMTHTWSLCCPTPTLTRTTPGRSEKECDGQESLCVKANVNEEYLEAFRTKSYIEICNKAQGQLGRTIRRSPLLSSNNNSPSTNNSSSSTLPFCKHLTEFLLDPRQENITSMAETTKVHHLLVNYFESSLEACHCCDQILQGLHSMRLSYGRIKRVVKISKMVLDEDCNNNGDQQQQIQKDVIYRELASFALQNNPLSIQFHDIHQRFMELLHRLRSKRVKIQRKLTWKSICKKVAGIGLVTAHSAIVVALLVLCFHSIVGLVAAPGILGGFFGWLIKRIFKRKNSKNGRIRRSYCERLCEQLDVAAKGIYIVINELNTVSRMVMRLHDEVEHRRVIAQVCVRNYGKSEILRQVLRDLNDNQSSFLDQLEELENHIYFCFLTINRSRSLLLQEITQDL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0040 397 PANTHER UPF0496 PROTEIN 2-RELATED 22 396 - -
Ahy16g0040 397 PANTHER UPF0496 PROTEIN 3-RELATED 22 396 IPR007749 -
Ahy16g0040 397 Coils Coil 354 374 - -
Ahy16g0040 397 MobiDBLite consensus disorder prediction 67 89 - -
Ahy16g0040 397 Pfam Protein of unknown function (DUF677) 111 393 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0040 Ahy-Chr16 360595 362670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0040 - - gmx:100790505 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0040 16 360595 362670 Ahy16g0040 16 360595 362670 ECH
Ahy16g0040 16 360595 362670 Ahy6g1302 6 19644787 19646883 hybridization