Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0033 ATGGGACTGGGGCTGTTCAGGATGTTCAACTGCTTCAGTAGTAAGCCCCGTGAAATTCCGATTATTCTAGGGTCGGAGACGCCGCCGCGGCCAAAGCAGAGGCAGCAGAAAGAAGAGTTGGGGGGCGGGGGGCAGTCAAAGATAGGAGGAATCCTGGGGAGGCCATACGTGGACATAAATACGATGTACGAGATGAAGAAGGAGCTGGGAAGAGGGCAGTCAGGGGTGACATACCTGTGCATAGAGAGGTCGACGGGGAGGGAATACGCATGCAAGACGATTGCAAGAGGGAAGCTGGTGAGGAAGGAAGAGATAGAAGACGTGAGGAGGGAGATAATGATATTGCAGCACCTGTCAGGGCAGCCCAACATAGTGGAGTTTCGTGGGGCATACGAGGACAGGCAGAACGTGCACGTGGTGATGGAGCTTTGCAGCGGAGGGGAGCTGTTTGACAGGATCATAGACAAGGCCAGGGGGAGTTACTCTGAGAGGGAGGCTGCTTCCATATGCAGGCAGATCGTCAATGTGGTTCATGTTTGCCACTTCATGGGTGTCATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTGGTTAGTAGGGATCAAAATGCTCCTTTGAAAGCCACTGATTTTGGTTTGTCTGTCTTCATTGAAGAAGATAAAGTGTACAAAGAAATAGTTGGAAGTGCATACTATGTGGCTCCGGAGGTGCTGAAACGCAATTATGGAAAGGAGATAGATGTGTGGAGTGCTGGAGTCATTCTATACATTCTCTTAAGCGGGGTGCCCCCATTTTGGGGTGAAAATGAGAAGCAGATCTTTGATGCTATCTTGGAAGGGAAATTAGATCTAGAAAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTAGCCTATGAACCTAAGAAACGCATCACAGCTTCTGCTGCCCTTGAACACCCTTGGATGAAGGAAGGGGGGGAAGCATCTGACAAGCCTATAGACAATGCGGTTTTAAGTAGGATGAAACAATTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTGATAGCACAAAACCTTTCAGAGGAAGAAATCAAGGGCCTGAAACAAATGTTCAACAATATGGATACGGATCGCAGCGGCACAATCACTTTCGAAGAACTAAAATCTGGTTTGTCCAGATTGGGATCCAAGCTTTCTGAAACTGAAATAAGGCAGCTAATGGATGCTGCTGATGTTGATAAGAGTGGAACCATTGACTATTATGAATTCATTACTGCCACCATGCATCGGCATAAACTTGAGAAGGAAGAAAATTTGTATAAGGCTTTTCAATACTTCGACAAGGATAGCAGCGGTTACATAACAAGAGATGAGCTTAGACATGCTTTGACTGAATATCAAATGGGAGATGAAGCAACTATTGATGAAGTCATTGATGACGTTGACACTGACAAGGATGGGAGGATCAACTACGAGGAGTTCGTGGCTATGATGAGGAAGGGGACATTGGATAATGAAGGGGTTATCGGCAAAGAGAGAACACGATAA 1560 0.4622 MGLGLFRMFNCFSSKPREIPIILGSETPPRPKQRQQKEELGGGGQSKIGGILGRPYVDINTMYEMKKELGRGQSGVTYLCIERSTGREYACKTIARGKLVRKEEIEDVRREIMILQHLSGQPNIVEFRGAYEDRQNVHVVMELCSGGELFDRIIDKARGSYSEREAASICRQIVNVVHVCHFMGVMHRDLKPENFLLVSRDQNAPLKATDFGLSVFIEEDKVYKEIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLSGVPPFWGENEKQIFDAILEGKLDLESAPWPSISAAAKDLIRKMLAYEPKKRITASAALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAQNLSEEEIKGLKQMFNNMDTDRSGTITFEELKSGLSRLGSKLSETEIRQLMDAADVDKSGTIDYYEFITATMHRHKLEKEENLYKAFQYFDKDSSGYITRDELRHALTEYQMGDEATIDEVIDDVDTDKDGRINYEEFVAMMRKGTLDNEGVIGKERTR* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0033 519 Gene3D Phosphorylase Kinase; domain 1 65 148 - -
Ahy16g0033 519 SMART serkin_6 63 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0033 519 ProSiteProfiles Protein kinase domain profile. 63 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0033 519 SMART efh_1 406 434 IPR002048 GO:0005509
Ahy16g0033 519 SMART efh_1 477 505 IPR002048 GO:0005509
Ahy16g0033 519 SMART efh_1 442 470 IPR002048 GO:0005509
Ahy16g0033 519 SMART efh_1 370 398 IPR002048 GO:0005509
Ahy16g0033 519 Pfam EF-hand domain pair 440 503 IPR002048 GO:0005509
Ahy16g0033 519 Pfam EF-hand domain pair 371 431 IPR002048 GO:0005509
Ahy16g0033 519 Gene3D - 331 507 - -
Ahy16g0033 519 MobiDBLite consensus disorder prediction 21 49 - -
Ahy16g0033 519 Gene3D Transferase(Phosphotransferase) domain 1 149 330 - -
Ahy16g0033 519 SUPERFAMILY EF-hand 362 503 IPR011992 -
Ahy16g0033 519 ProSiteProfiles EF-hand calcium-binding domain profile. 438 472 IPR002048 GO:0005509
Ahy16g0033 519 CDD STKc_CAMK 63 322 - -
Ahy16g0033 519 SUPERFAMILY Protein kinase-like (PK-like) 63 330 IPR011009 -
Ahy16g0033 519 ProSitePatterns Protein kinases ATP-binding region signature. 69 102 IPR017441 GO:0005524
Ahy16g0033 519 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Ahy16g0033 519 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Ahy16g0033 519 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Ahy16g0033 519 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Ahy16g0033 519 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 33 509 - -
Ahy16g0033 519 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Ahy16g0033 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 509 - -
Ahy16g0033 519 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Ahy16g0033 519 Pfam Protein kinase domain 63 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0033 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0033 Ahy-Chr16 304730 309327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0033 46 506 EF-hand Containing Proteins AT3G20410 72.451 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ahy16g0033 Pkinase 1.80E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0033 K13412 - gmx:100816157 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0033 16 304730 309327 Ahy16g0033 16 304730 309327 ECH
Ahy16g0033 16 304730 309327 Ahy6g1311 6 19776914 19781614 hybridization