Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0032 ATGGATCTGCAGGACTTCCTTCTTCGCGCTCGAGTCTTGAAGCTTTACAGGCAAGCATTGAGGATTTCTGCTCGAGCCCCTACTGCTGCTAAAGATGAACTGAGACAGACAATTAGACAAGAGATGGAAAATAATCGGGATTGTAAAGACAAGCAAAGGATCCGATACCTGATTAGTGAAGGAATGGAAAGATTGAAACGACTCGATGAAATGCTTGATATGCAAGGTCACTGA 234 0.4359 MDLQDFLLRARVLKLYRQALRISARAPTAAKDELRQTIRQEMENNRDCKDKQRIRYLISEGMERLKRLDEMLDMQGH* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0032 77 Coils Coil 31 51 - -
Ahy16g0032 77 Pfam Complex 1 protein (LYR family) 11 66 IPR008011 -
Ahy16g0032 77 CDD Complex1_LYR_LYRM2 7 68 IPR045293 -
Ahy16g0032 77 PANTHER LYR MOTIF-CONTAINING PROTEIN 2 1 77 - -
Ahy16g0032 77 PANTHER LYR MOTIF-CONTAINING PROTEIN 2 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0032 Ahy-Chr16 302663 304131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0032 - - ahf:112805419 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0032 16 302663 304131 Ahy16g0032 16 302663 304131 ECH
Ahy16g0032 16 302663 304131 Ahy6g1312 6 19782243 19783765 hybridization