Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0029 ATGGCTACCATCACCAACAGTTTCATATTCAAGTCCCCTGCATCTCTCTCCGTCTCCCTTTCAAGCCACCCAAATAAGCTGCTTCCACTTTCTTCTCTACAATTTCTGAGCACACAAGCACAATCTTCTTCTTGTGGTTCTGGTTGGCAACAGAGCCGGGTGATTACAAGAGCCACATCATCAGCAGCATCGGGGGCGAAAAAAGCAAGCGAGGAGAGAGTTCAGAAGGTTCATAGCATTGAGGAGTTCGACGACGCGCTTAGAGCGGCGAAGAACAGGCTGGTGGTGGTAGAATACGCATCGAGTGACAGCTTGGAGAGCAGCCAGATATACCCTTTCATGGTGGACCTTAGCAGGCAATGCAACGACGTTGAGTTCCTTCTCGTGATGGGTGACGAGTCCGACAAGACCCGCGACCTCTGCAAAAGAGAGAAAATCGACAAAGTGCCTCACTTCAGCTTCTACAAGAGCATGGAGAAGATCCACGAAGAGGAAGGTATTGGACCGGAGAGGCTGGTAGGGGATGTGCTATACTACGGGGACAGCCATTCAGCAGTGGTGCAGCTGCACAGCAGGGAGGACGTGGAGAAGCTGATAGAGGAGAACAAGGAAGGGCACAAGCTGGTGGTGCTGGACGTGGGCCTCAAGCACTGCGGCCCCTGCGTCAAGGTGTACCCCACCGTCCTCAAGCTCTCCAGGCAGATGGCCGACTCCGTCGTCTTCGCCAGGATGAACGGCGACGAGAATGACAGCTGCATGCAGTTCCTCAGGGACATGGACGTCGTGGAGGTCCCCACCTTCCTGTTCATCAGAGACGGCGTCATTCGTGGCCGATATGTTGGTTCTGGCAAGGGAGAGCTCATTGGCGAGATTCTCCGCTACCAAGGTGTGCGTGTCACTTACTAA 906 0.5397 MATITNSFIFKSPASLSVSLSSHPNKLLPLSSLQFLSTQAQSSSCGSGWQQSRVITRATSSAASGAKKASEERVQKVHSIEEFDDALRAAKNRLVVVEYASSDSLESSQIYPFMVDLSRQCNDVEFLLVMGDESDKTRDLCKREKIDKVPHFSFYKSMEKIHEEEGIGPERLVGDVLYYGDSHSAVVQLHSREDVEKLIEENKEGHKLVVLDVGLKHCGPCVKVYPTVLKLSRQMADSVVFARMNGDENDSCMQFLRDMDVVEVPTFLFIRDGVIRGRYVGSGKGELIGEILRYQGVRVTY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0029 301 SUPERFAMILY Thioredoxin-like 180 288 IPR036249 -
Ahy16g0029 301 Gene3D Glutaredoxin 180 295 - -
Ahy16g0029 301 Pfam Thioredoxin 204 286 IPR013766 -
Ahy16g0029 301 Gene3D Glutaredoxin 61 179 - -
Ahy16g0029 301 SUPERFAMILY Thioredoxin-like 66 169 IPR036249 -
Ahy16g0029 301 ProSiteProfiles Thioredoxin domain profile. 143 297 IPR013766 -
Ahy16g0029 301 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 1 301 IPR044192 GO:0016671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0029 Ahy-Chr16 286040 287582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0029 - - minc:123202645 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0029 16 286040 287582 Ahy16g0029 16 286040 287582 ECH
Ahy16g0029 16 286040 287582 Ahy6g1322 6 19927967 19929466 hybridization