Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0025 ATGGGGGTGAAGAGAGGGGTTGCTACCGCCGTGGTGTTGTGTGTGTTGGCTTTTGTGAGCGTGAGTCTTGGTGAAGATCCCTACAGGTTCTTCGACTGGAATGTTACCTACGGCGACATTTACCCGCTCGGTGTTCGTCAACAGGGAATACTTATAAACGGCCAATTCCCAGGACCAGACATTCATTCAGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGCTTGGACCAGCCCTTTCTCCTCTCCTGGAATGGGGTCCAACAGAGAAGGAACTCATACGAGGATGGGGTGTTTGGAACAACATGTCCCATCCCACCGGGGAAGAACTTCACTTACATACTTCAAGTGAAGGATCAGATTGGAAGCTTTTACTACTTCCCTTCTCTTGCATTCCACAAAGCTGCGGGCGGCTTCGGAGGCATCAGGATCCTCAGCAGGCCAAGGATCCCGGTCCCCTTCCCTGATCCCGCCGGCGATTACACTGTTTTCATTGGAGACTGGTACAAGGCCAACCACACGGATTTGCAAAGGCAACTTGATAGCGGAAGAAAGCTAGCACTCCCCGATGGAATCCTGATCAATGGTCGCGGGGACAACGGGGCCTCATTCAACGTGGAACAAGGAAAGACTTACAGGCTGAGAATATCAAATGTGGGGCTGGAGAATTCCCTGAATTTCCGCATACAAAACCACAAGATGACCCTGGTGGAAGTGGAAGGAACCCATACCCTTCAGACCACATACTCCTCTCTCGATGTCCACGTTGGTCAATCCTACTCCGTCCTAGTCACCGCCGATCAACCTCCCCGGGACTACTACATCGTGGTTTCCACTCGCTTCACCACCACAGTCCTCACCACCACCGGAATTCTTCGCTACAGCAACTCAGCAGGGCCAGTGCAGGGCCCGCCACCTGGGGGACCCACCATCCAGATTGACTGGTCGTTGAACCAGGCCCGGTCCATCAGGACGAACCTTACAGCAAGTGGGCCAAGGCCCAACCCGCAAGGGTCGTACCACTACGGTCTCATAAACCTGACGAGAACAATCGTGGTGTCGAGCTCAGCCGGGCAGGTGAATGGGAAGCAGAGATACGCCATTAACAGCGTGTCTTACGTTGCACCCGACACTCCTCTCAAGGTGGCCGACTTCTTCAAGATCCCCGGCGTCTTCCGCGTGGGGAGCATATCCGACAGGCCCAGCGGCTCTGCCATCTACCTTGACACGTCTGTCATGCAGACTGACTACAGAACTTTTGTGGAGATTGTCTTCCAGAACGACGAGGACATCATCCAGTCCTATCATCTTGATGGCTACTCTTTCTTCGTTGTTGGTATGGATGGAGGAACATGGACAGCTGGTAGCAGGAACGAGTACAATCTTCGAGACGCAGTTTCGCGATGCACGACGCAGGTATATCCAAAGTCATGGACAGCAATATATGTGGCGTTGGACAACGTGGGAATGTGGAACTTGAGATCTGAATTCTGGGCAAGGCAATACCTGGGCCAACAATTCTATATGAGAGTGTACACAACATCCACTTCCCTCAGAGATGAATACCCTATTCCCAAGAATGCTCTTCTCTGTGGAAAGGCCTCTGGCCGACACACCCGACCCCTCTAA 1632 0.5257 MGVKRGVATAVVLCVLAFVSVSLGEDPYRFFDWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSYEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVFIGDWYKANHTDLQRQLDSGRKLALPDGILINGRGDNGASFNVEQGKTYRLRISNVGLENSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPPRDYYIVVSTRFTTTVLTTTGILRYSNSAGPVQGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINLTRTIVVSSSAGQVNGKQRYAINSVSYVAPDTPLKVADFFKIPGVFRVGSISDRPSGSAIYLDTSVMQTDYRTFVEIVFQNDEDIIQSYHLDGYSFFVVGMDGGTWTAGSRNEYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYPIPKNALLCGKASGRHTRPL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0025 543 Gene3D - 28 149 IPR008972 -
Ahy16g0025 543 Gene3D - 344 540 IPR008972 -
Ahy16g0025 543 Pfam Multicopper oxidase 161 297 IPR001117 -
Ahy16g0025 543 SUPERFAMILY Cupredoxins 24 175 IPR008972 -
Ahy16g0025 543 Pfam Multicopper oxidase 35 148 IPR011707 GO:0005507
Ahy16g0025 543 Pfam Multicopper oxidase 389 515 IPR011706 GO:0005507|GO:0016491
Ahy16g0025 543 Gene3D - 159 308 IPR008972 -
Ahy16g0025 543 PANTHER OSJNBA0084K11.18 PROTEIN 13 536 - -
Ahy16g0025 543 SUPERFAMILY Cupredoxins 155 335 IPR008972 -
Ahy16g0025 543 SUPERFAMILY Cupredoxins 345 534 IPR008972 -
Ahy16g0025 543 CDD CuRO_3_AAO_like_1 377 497 IPR034275 GO:0005507
Ahy16g0025 543 CDD CuRO_1_AAO_like_1 30 145 IPR034273 GO:0005507
Ahy16g0025 543 PANTHER MULTI-COPPER OXIDASE 13 536 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0025 Ahy-Chr16 257237 261158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0025 - - gmx:100812416 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0025 16 257237 261158 Ahy16g0025 16 257237 261158 ECH
Ahy16g0025 16 257237 261158 Ahy17g2204 17 105563919 105568990 PCT
Ahy16g0025 16 257237 261158 Ahy8g0168 8 3240084 3245138 PCT
Ahy17g2204 17 105563919 105568990 Ahy16g0025 16 257237 261158 PCT
Ahy8g0168 8 3240084 3245138 Ahy16g0025 16 257237 261158 PCT