Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0023 ATGGCAAGTCAGGGCTCTAATGAAGGCTCTAGTTCCGGCATTACATCGGCTGAGTGTTCGGATTCAACTGTTCAACTCAACATCAAGACTCTAGATTCACGGGTCTATAATTTTCAACTGGACAAAAATATGCCTGTTTCGTTGTTAAAGGAGAAAATTGCAAATGAAATTGGTCTTCCAGTTGGTCAGCAACGGCTGATTTTTAGAGGAAAAGTCTTAAAGGACGAGCATGTGCTATCTGAGTATCATATCGAGAATGGGCATACCTTGCATCTAGTTGAAAGGCAACCAAATCAGTCACAGGCTTCTGGTAATAGTACTGCTGAGCCAGCTGGTGCTAATGGTAATGCAGGAAATGATGCAGCCTCCGTGCCTCCTCGTAACCGTGTTGGACAAATTTCACACAGTGTTGTTCTTGGAACTTTTAATGTGGGGGACCAAGGGGAAGGCATTGTTCCTGACCTTACACGGGTTATTGGGGCAGTTTTGAATTCTATTGGAATTGGTGGTCAGAACACAAGTAGTCCTCCCAATGCTACCCAACCTGCTACAGCTCCGCTAGGGAATGAAGCTGCGGGCGTGAATTCTGGGAATCAAAATGCATCTGGAAATCAAGCACAGTCTGGCCAGACATTTCCTGGTCAGGCATTCCAATCTCTGCCTCATGTTGTTCAAATTCCTGTGGCTTCTGGGGCCATACCAATCCCTTCTCTCAATGCTCCAATTCCTGATTCATTGAACACACTCTCTGAATTTATAAATCGCATGGAACAGACACTATTGCTAAATGGTTATCAGTCAAATTTATCTTCAACTAATGCTGGAGATCAACGGGTTGAATTGCCTACCAATGCACAAGGGTTGCCGACAGTTGAAGCATTAAGCACCATCTTGCATCGTACAGAACAGTTGCTTAGTCATCAAGCTGTTGCTGCGATATCTCATATTGCTGGACGGTTGGAGCGAGAGGGAACTTCGTCTGATTTAAGTATAAGGGATCAAATACAGTCAGAGTCAGCACAATTAGGACTTGCTATGCAGCATTTGGGCACACTTTTACTTGAGCTTGGCCGAACAATCTTAACCCTGCGCATGGGACAGTCTCCTGCAGAATCTGCTGTAAATGCTGGACCTGCAGTTTATATTTCTCCATCAGGGCCAAATCCTGTAATGGTTCAGCCCTTTCCTCTTCAGACAAACTCACTATTTGGTGGTCCTATTCCTTCTTCAACTCCTCCAGCATTTGGTGCCATTGGTATTGGAAGTGCTCCGCGGAATGTGAACATTCATATACATGCTGGTACTGCTCTTGCTCCCATTGTTTCAGCAATTAGTTCTAGGACAAATAATGGAGAAGGGACAAGAAATGAAAACCGTAATGAGCCTGGCCCTGGGGATTCAGGTTCTGCACGTGCGTTGCCCGTTAGAAATTTCATGTCGGCAGCCTTCCCATCTCACCCTCCTGGTGTTGGAGTTGCCAGTGGCACACAGACTGGGTTAGGTGTTTCTACTTCACAGCCACCACCTAATTCAACTCCATGGTCATCTGCTGCAAATGAAGCGAATTTCTTTAGGAACTTAGTTCGTAATATACAAGGAGATAACACAGCTCCATCAGGTCAGATGGCATCAACTGGCCGAGACTTGTCTTCTGGTTCTGAATCAAGGTCTTCCCAGAGAGATGAGCAGGCAGATACCACCGGGATGAATGGCTTCAGAACTGCAACTGCATCCTCAGTTGGCTGTGGCTCTCTCCAAACTGAGGCAGTGCAAACCTGTGATAATGATGAGAGAGTTGTTTCAGTTGACAATTACCCTTCAAGTTCTTCCGGTCAAGGTTTACAAAGCTCTTCTGGTGGAGAAACAACAGTGAAATCAGAACAAGTAAAGGATGCTCCATCTGCAAGTGCGAAACAGGGTGTAGCTGAACCTGCCAGAGCTGCTCCTCTTGGATTGGGCATGGGTGGCTTGGAGCGTAAGAGGCGGACGCGACTTCAACCTCCTGTAAGTAAAGGCGCTGATGTATCATCCGGTTCTTCTGTCAACCAAAGTCACCAAACTGGAACAGAGGGTCAACACACATTACAAGCTCTTCCAAGTCATGGCTCTTCTGTGAATGCAAGAAATCCTAATAGACCATCCCAGCAGCCGCTACCCTCTAGTAATAGGCAGATTGATATGGCTGGTTTGATGTCTCAGGTTTTGCATAGCCCTGCTTTGAATGGTTTGCTTGAAGGGGTTTCACAGCAAACTGGGGTTGACTCACCTAATGGCTTGAGGAATATGTTGCAGCAGTTCACGCAGAGCCCACAGATGATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATATGGGAAATATGTTTGCCGGGATGGAAAGGGGGCAAGGGGGTGGCATTGATTTTTCAACGATTCTTCAACAGCTGATGCCTATTGTATCCCGAGCGCCTGGTGGGGATACTCCTCCTCCACTATTCTCTGCTGTAGAACCTGAAAACTCCGATAATACAACTTTACAGCTCAACCTTCAAGAAGTGGTGGATAGGATTGATCACTTGAGCCCACCAACAGATGTTTTCCGTGCTGTAGCTGAAAATGCCGTCCTGGTATCTGGGGGTGTAAATGTTACCGATGATATTCTGGATGAGTTATGCAGTAATGAGAGTCTTGCCAGCGAATATTTGGAGACGTTGCGATATGATGTGAGACAGCGGCTAAATGGACATTCTGAGCAGGACAAGTCGTAA 2757 0.4621 MASQGSNEGSSSGITSAECSDSTVQLNIKTLDSRVYNFQLDKNMPVSLLKEKIANEIGLPVGQQRLIFRGKVLKDEHVLSEYHIENGHTLHLVERQPNQSQASGNSTAEPAGANGNAGNDAASVPPRNRVGQISHSVVLGTFNVGDQGEGIVPDLTRVIGAVLNSIGIGGQNTSSPPNATQPATAPLGNEAAGVNSGNQNASGNQAQSGQTFPGQAFQSLPHVVQIPVASGAIPIPSLNAPIPDSLNTLSEFINRMEQTLLLNGYQSNLSSTNAGDQRVELPTNAQGLPTVEALSTILHRTEQLLSHQAVAAISHIAGRLEREGTSSDLSIRDQIQSESAQLGLAMQHLGTLLLELGRTILTLRMGQSPAESAVNAGPAVYISPSGPNPVMVQPFPLQTNSLFGGPIPSSTPPAFGAIGIGSAPRNVNIHIHAGTALAPIVSAISSRTNNGEGTRNENRNEPGPGDSGSARALPVRNFMSAAFPSHPPGVGVASGTQTGLGVSTSQPPPNSTPWSSAANEANFFRNLVRNIQGDNTAPSGQMASTGRDLSSGSESRSSQRDEQADTTGMNGFRTATASSVGCGSLQTEAVQTCDNDERVVSVDNYPSSSSGQGLQSSSGGETTVKSEQVKDAPSASAKQGVAEPARAAPLGLGMGGLERKRRTRLQPPVSKGADVSSGSSVNQSHQTGTEGQHTLQALPSHGSSVNARNPNRPSQQPLPSSNRQIDMAGLMSQVLHSPALNGLLEGVSQQTGVDSPNGLRNMLQQFTQSPQMMNTVNQIVQQVGSQDMGNMFAGMERGQGGGIDFSTILQQLMPIVSRAPGGDTPPPLFSAVEPENSDNTTLQLNLQEVVDRIDHLSPPTDVFRAVAENAVLVSGGVNVTDDILDELCSNESLASEYLETLRYDVRQRLNGHSEQDKS* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0023 918 MobiDBLite consensus disorder prediction 601 633 - -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 670 722 - -
Ahy16g0023 918 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Ahy16g0023 918 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 916 - -
Ahy16g0023 918 Gene3D - 14 108 - -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 169 213 - -
Ahy16g0023 918 CDD Ubl_ubiquitin_like 26 93 - -
Ahy16g0023 918 SUPERFAMILY Ubiquitin-like 13 98 IPR029071 -
Ahy16g0023 918 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Ahy16g0023 918 MobiDBLite consensus disorder prediction 532 572 - -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 96 113 - -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 532 553 - -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 496 517 - -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 96 128 - -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 447 463 - -
Ahy16g0023 918 PRINTS Ubiquitin signature 76 97 IPR019956 -
Ahy16g0023 918 PRINTS Ubiquitin signature 55 75 IPR019956 -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 601 722 - -
Ahy16g0023 918 MobiDBLite consensus disorder prediction 447 517 - -
Ahy16g0023 918 PANTHER OS07G0498800 PROTEIN 6 916 - -
Ahy16g0023 918 SMART ubq_7 24 95 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0023 Ahy-Chr16 231220 238343 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0023 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 1.68e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0023 - - gmx:100783611 1267.68