Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy16g0018 | ATGGCAAGTCAGGGCTCTAATGAAGGCTCTAGTTCCGGCATTACATCGGCTGAGTGTTCGGATTCAACTGTTCAACTCAACATCAAGACTCTAGATTCACGGGTCTATAATTTTCAACTGGACAAAAATATGCCTGTTTCGTTGTTAAAGGAGAAAATTGCAAATGAAATTGGTCTTCCAGTTGGTCAGCAACGGCTGATTTTTAGAGGAAAAGTCTTAAAGGACGAGCATGTGCTATCTGAGTATCATATCGAGAATGGGCATACCTTGCATCTAGTTGAAAGGCAACCAAATCAGTCACAGGCTTCTGGTAATAGTACTGCTGAGCCAGCTGGTGCTAATGGTAATGCAGGAAATGATGCAGCCTCCGTGCCTCCTCGTAACCGTGTTGGACAAATTTCACACAGTGTTGTTCTTGGAACTTTTAATGTGGGGGACCAAGGGGAAGGCATTGTTCCTGACCTTACACGGGTTATTGGGGCAGTTTTGAATTCTATTGGAATTGGTGGTCAGAACACAAGTAGTCCTCCCAATGCTACCCAACCTGCTACAGCTCCGCTAGGGAATGAAGCTGCGGGCGTGAATTCTGGGAATCAAAATGCATCTGGAAATCAAGCACAGTCTGGCCAGACATTTCCTGGTCAGGCATTCCAATCTCTGCCTCATGTTGTTCAAATTCCTGTGGCTTCTGGGGCCATACCAATCCCTTCTCTCAATGCTCCAATTCCTGATTCATTGAACACACTCTCTGAATTTATAAATCGCATGGAACAGACACTATTGCTAAATGGTTATCAGTCAAATTTATCTTCAACTAATGCTGGAGATCAACGGGTTGAATTGCCTACCAATGCACAAGGGTTGCCGACAGTTGAAGCATTAAGCACCATCTTGCATCGTACAGAACAGTTGCTTAGTCATCAAGCTGTTGCTGCGATATCTCATATTGCTGGACGGTTGGAGCGAGAGGGAACTTCGTCTGATTTAAGTATAAGGGATCAAATACAGTCAGAGTCAGCACAATTAGGACTTGCTATGCAGCATTTGGGCACACTTTTACTTGAGCTTGGCCGAACAATCTTAACCCTGCGCATGGGACAGTCTCCTGCAGAATCTGCTGTAAATGCTGGACCTGCAGTTTATATTTCTCCATCAGGGCCAAATCCTGTAATGGTTCAGCCCTTTCCTCTTCAGACAAACTCACTATTTGGTGGTCCTATTCCTTCTTCAACTCCTCCAGCATTTGGTGCCATTGGTATTGGAAGTGCTCCGCGGAATGTGAACATTCATATACATGCTGGTACTGCTCTTGCTCCCATTGTTTCAGCAATTAGTTCTAGGACAAATAATGGAGAAGGGACAAGAAATGAAAACCGTAATGAGCCTGGCCCTGGGGATTCAGGTTCTGCACGTGCGTTGCCCGTTAGAAATTTCATGTCGGCAGCCTTCCCATCTCACCCTCCTGGTGTTGGAGTTGCCAGTGGCACACAGACTGGGTTAGGTGTTTCTACTTCACAGCCACCACCTAATTCAACTCCATGGTCATCTGCTGCAAATGAAGCGAATTTCTTTAGGAACTTAGTTCGTAATATACAAGGAGATAACACAGCTCCATCAGGTCAGATGGCATCAACTGGCCGAGACTTGTCTTCTGGTTCTGAATCAAGGTCTTCCCAGAGAGATGAGCAGGCAGATACCACCGGGATGAATGGCTTCAGAACTGCAACTGCATCCTCAGTTGGCTGTGGCTCTCTCCAAACTGAGGCAGTGCAAACCTGTGATAATGATGAGAGAGTTGTTTCAGTTGACAATTACCCTTCAAGTTCTTCCGGTCAAGGTTTACAAAGCTCTTCTGGTGGAGAAACAACAGTGAAATCAGAACAAGTAAAGGATGCTCCATCTGCAAGTGCGAAACAGGGTGTAGCTGAACCTGCCAGAGCTGCTCCTCTTGGATTGGGCATGGGTGGCTTGGAGCGTAAGAGGCGGACGCGACTTCAACCTCCTGTAAGTAAAGGCGCTGATGTATCATCCGGTTCTTCTGTCAACCAAAGTCACCAAACTGGAACAGAGGGTCAACACACATTACAAGCTCTTCCAAGTCATGGCTCTTCTGTGAATGCAAGAAATCCTAATAGACCATCCCAGCAGCCGCTACCCTCTAGTAATAGGCAGATTGATATGGCTGGTTTGATGTCTCAGGTTTTGCATAGCCCTGCTTTGAATGGTTTGCTTGAAGGGGTTTCACAGCAAACTGGGGTTGACTCACCTAATGGCTTGAGGAATATGTTGCAGCAGTTCACGCAGAGCCCACAGATGATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATATGGGAAATATGTTTGCCGGGATGGAAAGGGGGCAAGGGGGTGGCATTGATTTTTCAACGATTCTTCAACAGCTGATGCCTATTGTATCCCGAGCGCCTGGTGGGGATACTCCTCCTCCACTATTCTCTGCTGTAGAACCTGAAAACTCCGATAATACAACTTTACAGCTCAACCTTCAAGAAGTGGTGGATAGGATTGATCACTTGAGCCCACCAACAGATGTTTTCCGTGCTGTAGCTGAAAATGCCGTCCTGGTATCTGGGGGTGTAAATGTTACCGATGATATTCTGGATGAGTTATGCAGTAATGAGAGTCTTGCCAGCGAATATTTGGAGACGTTGCGATATGATGTGAGACAGCGGCTAAATGGACATTCTGAGCAGGACAAGTCGTAA | 2757 | 0.4621 | MASQGSNEGSSSGITSAECSDSTVQLNIKTLDSRVYNFQLDKNMPVSLLKEKIANEIGLPVGQQRLIFRGKVLKDEHVLSEYHIENGHTLHLVERQPNQSQASGNSTAEPAGANGNAGNDAASVPPRNRVGQISHSVVLGTFNVGDQGEGIVPDLTRVIGAVLNSIGIGGQNTSSPPNATQPATAPLGNEAAGVNSGNQNASGNQAQSGQTFPGQAFQSLPHVVQIPVASGAIPIPSLNAPIPDSLNTLSEFINRMEQTLLLNGYQSNLSSTNAGDQRVELPTNAQGLPTVEALSTILHRTEQLLSHQAVAAISHIAGRLEREGTSSDLSIRDQIQSESAQLGLAMQHLGTLLLELGRTILTLRMGQSPAESAVNAGPAVYISPSGPNPVMVQPFPLQTNSLFGGPIPSSTPPAFGAIGIGSAPRNVNIHIHAGTALAPIVSAISSRTNNGEGTRNENRNEPGPGDSGSARALPVRNFMSAAFPSHPPGVGVASGTQTGLGVSTSQPPPNSTPWSSAANEANFFRNLVRNIQGDNTAPSGQMASTGRDLSSGSESRSSQRDEQADTTGMNGFRTATASSVGCGSLQTEAVQTCDNDERVVSVDNYPSSSSGQGLQSSSGGETTVKSEQVKDAPSASAKQGVAEPARAAPLGLGMGGLERKRRTRLQPPVSKGADVSSGSSVNQSHQTGTEGQHTLQALPSHGSSVNARNPNRPSQQPLPSSNRQIDMAGLMSQVLHSPALNGLLEGVSQQTGVDSPNGLRNMLQQFTQSPQMMNTVNQIVQQVGSQDMGNMFAGMERGQGGGIDFSTILQQLMPIVSRAPGGDTPPPLFSAVEPENSDNTTLQLNLQEVVDRIDHLSPPTDVFRAVAENAVLVSGGVNVTDDILDELCSNESLASEYLETLRYDVRQRLNGHSEQDKS* | 919 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 601 | 633 | - | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 670 | 722 | - | - | |
Ahy16g0018 | 918 | ProSiteProfiles | Ubiquitin domain profile. | 24 | 99 | IPR000626 | GO:0005515 | |
Ahy16g0018 | 918 | PANTHER | LARGE PROLINE-RICH PROTEIN BAG6 | 6 | 916 | - | - | |
Ahy16g0018 | 918 | Gene3D | - | 14 | 108 | - | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 169 | 213 | - | - | |
Ahy16g0018 | 918 | CDD | Ubl_ubiquitin_like | 26 | 93 | - | - | |
Ahy16g0018 | 918 | SUPERFAMILY | Ubiquitin-like | 13 | 98 | IPR029071 | - | |
Ahy16g0018 | 918 | Pfam | Ubiquitin family | 26 | 96 | IPR000626 | GO:0005515 | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 532 | 572 | - | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 96 | 113 | - | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 532 | 553 | - | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 496 | 517 | - | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 96 | 128 | - | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 447 | 463 | - | - | |
Ahy16g0018 | 918 | PRINTS | Ubiquitin signature | 76 | 97 | IPR019956 | - | |
Ahy16g0018 | 918 | PRINTS | Ubiquitin signature | 55 | 75 | IPR019956 | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 601 | 722 | - | - | |
Ahy16g0018 | 918 | MobiDBLite | consensus disorder prediction | 447 | 517 | - | - | |
Ahy16g0018 | 918 | PANTHER | OS07G0498800 PROTEIN | 6 | 916 | - | - | |
Ahy16g0018 | 918 | SMART | ubq_7 | 24 | 95 | IPR000626 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy16g0018 | Ahy-Chr16 | 189148 | 196270 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy16g0018 | 24 | 95 | Cytoplasmic Ribosomal Protein Gene Family | AT3G52590 | 38.889 | 1.68e-10 | 58.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy16g0018 | - | - | gmx:100783611 | 1267.68 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy16g0018 | 16 | 189148 | 196270 | Ahy6g1328 | 6 | 20066686 | 20073825 | hybridization |