Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0010 ATGTTAATTAAGAATGCAAATGGAACCGTCATTGCCGTCAAAAAATTGAACTCCGAAAGCTTACAGGGGCTTGAGGAGTGGAAGTCAGAAGTAAATTTTCTGGGACGCCTCTCTCATCCTAACCTTGTTAAGTTGTTGGGATACTGCTTGGAGGAAGCAGAACTTCTTCTCATCTATGAATTTATGCAGAAGGGCAGTTTGGAAAACCACCTATTCGGAAGGGGCTCTGCTGTTCAACCACTTCCATGGGATATTAGGCTTAAGATTGCAATCGGAGCAGCTCGTGGCCTTGCCTTCTTGCATACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTCGATGGGGCCTATAATGCAAAGATATCAGACTTTGGCTTGGCAAAACTGGGTCCTTCAGCTAGTCGCTCCCATGTGACAACTAGGGTGATGGGCACATATGGTTATGCAGCTCCTGAATATGTTGCTACAGGGCATCTGTATGTGAAGAGTGACGTGTATGCATTTGGAGTAGTTTTGGTGGAGATGCTAACAGGGCTACGAGCACTTGACCCAAACCGCCCAAGTGGGCAACATAATCTAACAGATTGGATCAAACCATACCTGCATGATAGAAGAAAGCTGAAAAGCATTATGGATTTTCGGTTGGAAGGAAAATATCCGTCCAAAGCTGCATTTCGTATAGCTCAGCTTGCGCTGAGATGTCTTGAAACTGAGCCCAAACAGCGGCCGTCAATGAAGGAAGTTTTGGAGAGCTTGGAGCGATTTCATGCTGCCAATGAGAAGGAGGCCACTCAGATAAACATGCCTAAAACATTTGTCAGGTCAAATTATTATCAACAGATGTTCGTTTTCAACGATAAATTCGTCGATAATAATTGGAGAAAAAACGGAAAAATAGGCGCGAAATTTTATGTGGGATTTAGCGGTGAATTTTTTTCGCCAGTAAATCTAATTAGTGGAATGCTGCCTTTTGGTAACCCACAATGCGTTACTGTCAGATTTATCTGCCGATAA 1029 0.4325 MLIKNANGTVIAVKKLNSESLQGLEEWKSEVNFLGRLSHPNLVKLLGYCLEEAELLLIYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLAKLGPSASRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYAFGVVLVEMLTGLRALDPNRPSGQHNLTDWIKPYLHDRRKLKSIMDFRLEGKYPSKAAFRIAQLALRCLETEPKQRPSMKEVLESLERFHAANEKEATQINMPKTFVRSNYYQQMFVFNDKFVDNNWRKNGKIGAKFYVGFSGEFFSPVNLISGMLPFGNPQCVTVRFICR* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0010 342 CDD STKc_IRAK 7 260 - -
Ahy16g0010 342 SUPERFAMILY Protein kinase-like (PK-like) 6 268 IPR011009 -
Ahy16g0010 342 Gene3D Transferase(Phosphotransferase) domain 1 63 284 - -
Ahy16g0010 342 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 4 269 - -
Ahy16g0010 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Ahy16g0010 342 PANTHER OS01G0588500 PROTEIN-RELATED 4 269 - -
Ahy16g0010 342 Pfam Protein kinase domain 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0010 342 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0010 342 Gene3D Phosphorylase Kinase; domain 1 3 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0010 Ahy-Chr16 101406 110201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0010 6 296 Receptor kinase-like Gene Family AT4G02010 47.458 8.20e-87 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy16g0010 Pkinase 2.50E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0010 - - aip:107646235 643.269