Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3811 ATGACTGTGACGTGTCTATTTATAAAATATTATCACACATCCCTCCCCTCCTTCCCTGTATCTCTAATCCTTGCCCTCCCTAACCCTCTCTTGAGTTCAAGAACCGAATGGTTTTCGTTGCTTCAACTTCGATCTTCATTGGGTATAAGAGCAAAAAACTGGCCAAGAAAAACCAAACCATGCCGGAACTGGACCGGAATTCATTGCCAAAAGGGTTCAGTTATCGGAATCAACATTTCCGGTTTCAGAAGAACACATAAAGCTAGTCTTCACCCAAGTTTCTCTGTTGATGCACTTGCCAATTTTACCCGTTTAGCTTCCTTCAATGCTTCAGGTTTTGTGCTTAATGGTTCTATTCCTGAGTGGTTTGGTGACAAAAGCAATAACAACTACCTTGGTGCACTCCAGGTGCTTGATTTAAGTTCTTGCTCAATAACTGGCTCTATTCCTGAGTCAATTGGTGGTTTGATTTTGTTGAAGTCTGTGTTACTTTCTGGGAATAGCTTAACTGGTAGAATGCCTTCAGGTTTGGGAATATTGTCTAATTTAATTGTGCTTGATCTCTCAGAAAATGAACTTTCTGGGTCTATTATTGATTCATTGTTTTCACTTGGTAACCTCACAAGTCTTAATCTTTCTTCCAATTACTTATCTGGGAATGTTCCGAATCAACTTAGTAACCTTTCAGGGCTTGAAACTTTGGACCTTTCCAACAATGCACTAACTGGTAATGTGCCTAGTGTCTTGTTTTCTCGCCTTTCGAAACTTCGAGTTCTCAATTTAAGTGGTAACTTTATTGATGGTGATCTTCCTGATACTTTGTGGTCATTACCGAGCTTGCGTTTCGTTGATGTGTCCAACAACAACCTTACCGGTCCTCTACCGAAATTTTTCGGTTCAAATACTAGTTCTACTGATGCCACATTCAAGAGAGAATCATATGTTGTGGAGTTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGATCCCAATCTTGGGACATTGCTTGGAGAATGACAATGAGAAATGTATAGTTTACAAGTATATGCCAAATGGAGATTTGGCAAGTTCTTTGCAGAGAGTCACCGATGCAGATGGTAAATCGAAGTCCCTTGATTGGATCACGAGATTGAAAATCGCTACGGGAGCTGCCAAAGGCCTTGCTTATCTACATGATTGCAGCCATCCCCTCGCTCACAGAGATGTTCAAGCTAGCAGCATACTTCTTGATGATAAATTTGAGGTGCGACTTGGAAGTTTGAGTGAGGTTACCACCCAAGGAGATGTCCATCCTGGTGTCATGAACAGGCTGTTCATCAAGCCATCATCTTCTAATCAACCAAATTTTGGTAAGTAA 1359 0.4077 MTVTCLFIKYYHTSLPSFPVSLILALPNPLLSSRTEWFSLLQLRSSLGIRAKNWPRKTKPCRNWTGIHCQKGSVIGINISGFRRTHKASLHPSFSVDALANFTRLASFNASGFVLNGSIPEWFGDKSNNNYLGALQVLDLSSCSITGSIPESIGGLILLKSVLLSGNSLTGRMPSGLGILSNLIVLDLSENELSGSIIDSLFSLGNLTSLNLSSNYLSGNVPNQLSNLSGLETLDLSNNALTGNVPSVLFSRLSKLRVLNLSGNFIDGDLPDTLWSLPSLRFVDVSNNNLTGPLPKFFGSNTSSTDATFKRESYVVELELLSKVSHARLIPILGHCLENDNEKCIVYKYMPNGDLASSLQRVTDADGKSKSLDWITRLKIATGAAKGLAYLHDCSHPLAHRDVQASSILLDDKFEVRLGSLSEVTTQGDVHPGVMNRLFIKPSSSNQPNFGK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3811 452 PRINTS Leucine-rich repeat signature 183 196 - -
Ahy15g3811 452 PRINTS Leucine-rich repeat signature 228 241 - -
Ahy15g3811 452 Pfam Leucine rich repeat N-terminal domain 39 69 IPR013210 -
Ahy15g3811 452 PANTHER RECEPTOR-LIKE PROTEIN 55 36 299 - -
Ahy15g3811 452 SMART LRR_typ_2 132 156 IPR003591 -
Ahy15g3811 452 SMART LRR_typ_2 204 227 IPR003591 -
Ahy15g3811 452 SMART LRR_typ_2 180 203 IPR003591 -
Ahy15g3811 452 SMART LRR_typ_2 228 252 IPR003591 -
Ahy15g3811 452 SMART LRR_typ_2 277 300 IPR003591 -
Ahy15g3811 452 SMART LRR_typ_2 253 276 IPR003591 -
Ahy15g3811 452 Pfam Protein tyrosine and serine/threonine kinase 310 419 IPR001245 GO:0004672|GO:0006468
Ahy15g3811 452 PANTHER BNAA07G03560D PROTEIN 307 447 - -
Ahy15g3811 452 Gene3D Ribonuclease Inhibitor 196 304 IPR032675 -
Ahy15g3811 452 Pfam Leucine rich repeat 230 290 IPR001611 GO:0005515
Ahy15g3811 452 SUPERFAMILY Protein kinase-like (PK-like) 311 419 IPR011009 -
Ahy15g3811 452 PANTHER BNAA07G03560D PROTEIN 36 299 - -
Ahy15g3811 452 SUPERFAMILY L domain-like 37 303 - -
Ahy15g3811 452 PANTHER RECEPTOR-LIKE PROTEIN 55 307 447 - -
Ahy15g3811 452 Pfam Leucine Rich Repeat 135 156 IPR001611 GO:0005515
Ahy15g3811 452 Pfam Leucine Rich Repeat 206 228 IPR001611 GO:0005515
Ahy15g3811 452 ProSiteProfiles Protein kinase domain profile. 234 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g3811 452 Gene3D Ribonuclease Inhibitor 34 195 IPR032675 -
Ahy15g3811 452 Gene3D Transferase(Phosphotransferase) domain 1 305 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3811 Ahy-Chr15 160655939 160658599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3811 310 443 Miscellaneous Gene Families AT2G16250 64.706 2.49e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Ahy15g3811 PK_Tyr_Ser-Thr 2.90E-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3811 - - aip:107641591 872.848