Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3803 ATGTCGATGGTGCTGAGGAGGGTGTGGGAACTGGTGTCAAGCACGTCGAGAGGGAAAGTGGATGGGAGCGGAGCAGAGGCGTGTTCACGATCCGATCTGGGAGAGTTGGAGCAGCTGCCGGGAGACATATTGTTGCAAATCCTGAGGGTGTTGGGGCCCAAGGATGCAGCCAAAATGAGCTGCGTATGCAAGGCTCTCAGATGCCTCGTTTTCGACAATCGTTTGTGGGTTCACTTCCTTCAGACCTATCAGCCCGACCCTTCTTCCGACTCTCTTTTCTTTGCTGAGGCCACCTTGAGCTATGGCTACCCTCTCCCTCTTCCACCCTTCCATGCCCGCACCCCCCAGCTCTCCTTCAAGCATATTTATGGCCAACGAGCTCGCGTTCCTGGTTCCGTTATCATTGATGGCGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAATATGCCTCTCCATCCGGCCGTTCAGCAACGTTTTTGGAATTCGGTAACATCGAGTCTCCAATGTATACTAGACTACGACATTTTTTTGCAACTATATATAACAGGATGCAGGTGAAACCAAATACACAACCTGTTATTGTTTCCGTGCCAATATGTCATTATGATGATACTGAATCAGCTAAAGCATCAAGACGGCAGCTTAAAGAAGCAATCTATTCTGCCCTGTTTGACATGAATGTTCCCGCTGTTTGTGCTGTCAACCAGGCAACTCTAGCTCTGTTTGCTGCAAAACGTACTTCTGGAATAGCTGTTAATATAGGGTTTCAAGTCACATCTGTAGTTCCAATTTTTAATGGTAAAGTGATGCGCAGTGTGGGCGTGGAAGTTGTGGGACTGGGAGCACTAAAACTTACAGGATTTCTGAGGGAGAAGATGCAACTCAACAACCTAAATTTTCAGTCTTTATACACTGTCCGCACATTGAAAGAGAAGCTGTGCTATGTTGCTCTTGATTATGAAGCTGAGCTATCAAAAGATGCACAAGCATCATTTGAAGCTGTTGGAGAAGGACGGTTTACACTTTCAAAAGAGCGGTTTCAAACTGGAGAGATCTTATTCCAGCCTCATCTTGCTGGAGTGCAAGCAATGGGTTTGCACCAGGCCATAGCTCTTTGCATGGAGCATTGCCATTCTGCGGAATTAGCAGGTGACAGTGATTGGTACAAGACTGTAGTTTTATCAGGGGGTTCTGCATGCTTACCAGGTTTGGCAGAAAGGTTAGAGAAGGAACTAAAGGCCTTACTTCCTCCCTACATATCCAATGGAACCAGAGTCATACCTCCTCCATATGGTGCCGATACTCCTTGGTTTGGAGCAAAGATCATTGGCAATCTGAGCACATTTCCTGGTCCATGGTGTGTGACCAAGAAACAGTTCCGACAGAAGCCGAGACTCAACCTCATTTGGTGA 1413 0.4713 MSMVLRRVWELVSSTSRGKVDGSGAEACSRSDLGELEQLPGDILLQILRVLGPKDAAKMSCVCKALRCLVFDNRLWVHFLQTYQPDPSSDSLFFAEATLSYGYPLPLPPFHARTPQLSFKHIYGQRARVPGSVIIDGGSGYCKFGWSKYASPSGRSATFLEFGNIESPMYTRLRHFFATIYNRMQVKPNTQPVIVSVPICHYDDTESAKASRRQLKEAIYSALFDMNVPAVCAVNQATLALFAAKRTSGIAVNIGFQVTSVVPIFNGKVMRSVGVEVVGLGALKLTGFLREKMQLNNLNFQSLYTVRTLKEKLCYVALDYEAELSKDAQASFEAVGEGRFTLSKERFQTGEILFQPHLAGVQAMGLHQAIALCMEHCHSAELAGDSDWYKTVVLSGGSACLPGLAERLEKELKALLPPYISNGTRVIPPPYGADTPWFGAKIIGNLSTFPGPWCVTKKQFRQKPRLNLIW* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3803 470 Gene3D - 25 129 - -
Ahy15g3803 470 Pfam Actin 179 460 IPR004000 -
Ahy15g3803 470 SUPERFAMILY Actin-like ATPase domain 132 252 IPR043129 -
Ahy15g3803 470 Gene3D - 237 435 - -
Ahy15g3803 470 Gene3D Actin; Chain A, domain 4 280 363 - -
Ahy15g3803 470 SMART fbox_2 39 79 IPR001810 GO:0005515
Ahy15g3803 470 ProSiteProfiles F-box domain profile. 33 79 IPR001810 GO:0005515
Ahy15g3803 470 CDD NBD_sugar-kinase_HSP70_actin 133 283 - -
Ahy15g3803 470 PANTHER MACRONUCLEAR ACTIN 85 467 - -
Ahy15g3803 470 Gene3D - 176 462 - -
Ahy15g3803 470 PANTHER ACTIN 85 467 IPR004000 -
Ahy15g3803 470 Pfam F-box-like 37 78 IPR001810 GO:0005515
Ahy15g3803 470 SMART actin_3 130 460 IPR004000 -
Ahy15g3803 470 SUPERFAMILY Actin-like ATPase domain 246 461 IPR043129 -
Ahy15g3803 470 SUPERFAMILY F-box domain 27 126 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3803 Ahy-Chr15 160594592 160598451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3803 179 466 Cytoskeleton Gene Families AT3G12110 31.650 3.90e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3803 K16616 - gmx:100791973 790.03