Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3772 ATGGAAGACTACTCAGAGGAAGATTATGAGTTCCTGAACCTTAGCCTTTCAGTTACTACTCCTTCTTCTAGGGAAACCAACATGATCATGAAGAAAAAGAAGAAGAACTATGAAGCCAAGATCTTGAGGCTCCTCCAAGTCAGGGAAAACATGCTAAGACAAGATCACCATAACCACCATCACCACCTCCAAAGAAGAAAACCAGGCACCAACAACAACAACAATCTCATCCACTTGCTCCTCACAACGGCCACCGCCATTGACGAAGACAGCAACAACATTGCTGCATCTCTTGACAATCTCACAGATCTGTACCAAACAGTTTCCCTAACAGGTGATTCAGTTGAGCGTGTCGTGGCGTATTTCGCCGATGGCCTCGCCGCCAGGCTCCTCACAAAGAAATCTCCATTCTATGACATGCTCATGGAGGAGCCAACATGTGAAGAAGAGTTTCTTGCATTCACAGATCTCTATAGAGTCTCACCTTACTACCAATTCGCTCATTTCACTGCAAACCAAGCAATCTTAGAAGCCTTTGAAGAAGAAGAAGACAGGAACAACCGTTCAATCCATGTCATTGACTTTGACGTCTCCTACGGATTCCAATGGCCTTCTCTAATCCAATCACTCTCAGAGAAAGCTTCAAGCGGAAACCGCATATCTCTAAGGATCACCGGATTCGGCACCACTCTGAAGGAGCTTCAAGAAACGGAGTCCAGATTGGTGAGCTTCTCCAAAGGCTTCGGTAACCTTGTGTTCGAGTTTCAAGGGTTGTTGAGAGGGTCCAGGATCACGAATCTGAGGAAGAAGAAGAACGAGAGTGTTGCAGTGAACCTTGTTTCATACCTCAACAGTGCGAGTAACAGCAGTTTGTTGATGAATTTCTCTGACACATTGCGATTCGTACGGTCTCTCAGGCCTTCGGTTGTGGTGCTGGTGAAGCAAGAAGGTAGCAGGAGCATTAGAACGTTCTTGTCTCGGTTCACAGAGTCATTGCATTACTTTGCCGCCATGTTTGATTCCCTTGATGATTGTCTTCCGCTCGAGAGCGCAGAGAGGTTGAGGATTGAGAAGAAGCTTCTCGGGAAAGAGATCAAGAGCATGCTCAACTGTGACATGGACATGGACGGCGTGGATTGTCCCAAGTATGAGAGGATGGAAGCGTGGAAAGCCAGAATGGAGAATCATGGTTTTGTTGCCATGAAGATGAGCTCCAAATCTCTCATGCAAGCTAAGCTTCTTCTCAAGATGAGGACTCATTATTACTATTCTCCACCACTTCAATTTGATGATGATGCCGCCGCCGCCGCCGGCGGTGGTTTCAGGATTTCTGAAAGGGACCAGGGTAGAGCCATTTCTTTGGGGTGGCAGAATAGGTTTCTTCTCACTGTGTCCGCATGGCAATTACCACTTTCATCATCATAA 1425 0.466 MEDYSEEDYEFLNLSLSVTTPSSRETNMIMKKKKKNYEAKILRLLQVRENMLRQDHHNHHHHLQRRKPGTNNNNNLIHLLLTTATAIDEDSNNIAASLDNLTDLYQTVSLTGDSVERVVAYFADGLAARLLTKKSPFYDMLMEEPTCEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEEEEDRNNRSIHVIDFDVSYGFQWPSLIQSLSEKASSGNRISLRITGFGTTLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRITNLRKKKNESVAVNLVSYLNSASNSSLLMNFSDTLRFVRSLRPSVVVLVKQEGSRSIRTFLSRFTESLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNCDMDMDGVDCPKYERMEAWKARMENHGFVAMKMSSKSLMQAKLLLKMRTHYYYSPPLQFDDDAAAAAGGGFRISERDQGRAISLGWQNRFLLTVSAWQLPLSSS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3772 474 ProSiteProfiles GRAS family profile. 67 468 IPR005202 -
Ahy15g3772 474 Coils Coil 34 54 - -
Ahy15g3772 474 Pfam GRAS domain family 76 468 IPR005202 -
Ahy15g3772 474 PANTHER OSJNBA0084A10.13 PROTEIN 19 468 - -
Ahy15g3772 474 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 468 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3772 Ahy-Chr15 160382120 160383776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3772 79 468 GRAS Transcription Factor Family AT2G04890 32.494 4.31e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy15g3772 GRAS 3.00E-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3772 - - gmx:100813979 633.254