Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3722 ATGAGAAGAAAAGGGAGAGAGCTTCTTAACCTATGTATCTCTCTAAGCTCCCCATTGAAGCCTGAACCATGTGCATCTTCTTTTCATGGGGCTTCTAGAACTTTCTCACCATTTTCCGCTTCTTCTTCTTCCTTCTCCTCCTCCTCCAGCACCCTAACCCCTTGTGTTGAAGATGAAAAGGCTTCGGCAGCGTCCAAGACGCAGAAAGAATCAATGATTTTGGAAGAGTTCAGACAAAGGAAGCTGAAAGGGACTTCATCAAGTTCTTCTTCTCCTGATGGCGGTGCTGAGAAGAAAGAGGGGGAGTCCACTATGGTGGTTTCCAACTTCAGGGAGTTGGGTGTGGCTGAGGAGCTTGCTGAGGTTTTGGAAAAGATTGGTGATGGTGTTCCGAGTGAGATACAATGTGTTGTTATTCCAGCTGTTTTGGAAGGGAAGAATTTATTGTTGAGTTCACCCGCTGAACCTGACCGAACTTTGGCTTACCTGTTGCCCCTTATTCAGCTGCTGCGACATGGCGAGGTTGGTTTGGATTCAAAGCATCCCAGAGCCATTGTGCTTTGTGCTACCGAGGAGAAAGCTAATGAGTGTTTTAGTGCTGCAAAATATATCATGGAGATTGCGGAAGTGAAGTTGGCAAAGCAACGTTCTTCCCCAGATAATGAGCATTCAAATGTCTCAATTGGTCTTCTAGTCGGAACCCCTTCTGAGATTATTCAGTACGTTGAAGAGGGAACTGTTGTCCCTGCTGAAATAAGATATATGGTTTTGGATGATGTAGATTTCATGCTTGGTAGTGGCCTTGGTTCTAACATCCACAAGATTCTCGAACCATTGCAAGATCATGAATCAAAATCTTCTTACAAAAGATTGCAAACCATCCTAGTTACATCGCCGATCACCGAGGTTTTGGGTGATGAATCCCCCATTGTGAAGCATCTTGAGCGTGATCATGCTGGAAATATTTCTGCAATGTCTTTGGAAATGGATCAAAGAGAAGTGTTCCAATATACAGAGTCCCTGGATGCTCTTAGGAAAAAAGTGGCAGAGGCCATGGACACCCTTGTGTAA 1071 0.4463 MRRKGRELLNLCISLSSPLKPEPCASSFHGASRTFSPFSASSSSFSSSSSTLTPCVEDEKASAASKTQKESMILEEFRQRKLKGTSSSSSSPDGGAEKKEGESTMVVSNFRELGVAEELAEVLEKIGDGVPSEIQCVVIPAVLEGKNLLLSSPAEPDRTLAYLLPLIQLLRHGEVGLDSKHPRAIVLCATEEKANECFSAAKYIMEIAEVKLAKQRSSPDNEHSNVSIGLLVGTPSEIIQYVEEGTVVPAEIRYMVLDDVDFMLGSGLGSNIHKILEPLQDHESKSSYKRLQTILVTSPITEVLGDESPIVKHLERDHAGNISAMSLEMDQREVFQYTESLDALRKKVAEAMDTLV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3722 356 MobiDBLite consensus disorder prediction 37 103 - -
Ahy15g3722 356 Pfam DEAD/DEAH box helicase 133 297 IPR011545 GO:0003676|GO:0005524
Ahy15g3722 356 MobiDBLite consensus disorder prediction 37 56 - -
Ahy15g3722 356 Pfam Poly-adenylate binding protein, unique domain 309 355 IPR002004 GO:0003723
Ahy15g3722 356 Gene3D - 306 356 - -
Ahy15g3722 356 SMART poly_2 298 356 IPR002004 GO:0003723
Ahy15g3722 356 SUPERFAMILY PABC (PABP) domain 303 355 IPR036053 GO:0003723
Ahy15g3722 356 Gene3D - 53 305 IPR027417 -
Ahy15g3722 356 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 6 355 - -
Ahy15g3722 356 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39-LIKE 6 355 - -
Ahy15g3722 356 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 139 318 IPR014001 -
Ahy15g3722 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 302 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3722 Ahy-Chr15 160015163 160017506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3722 268 355 Eukaryotic Initiation Factors Gene Family AT4G34110 37.500 2.14e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3722 - - gmx:100800575 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3722 15 160015163 160017506 Ahy5g3286 5 114951275 114953561 hybridization