Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3721 ATGGCGGGAGCTACAGCAAGAACCCTCTTTCTCTCTTCCTCCTCCTTCACGCGCCTCTCTCATCGCTGCAATCTCATCCCACTCCTCACGCGCTCTAAGCCCATCATCAATGTTCCGCCGCCACGGTTCAGGACCTTCTGTTCCGTCGCCACCGCACCGGAAACTTCGGACACCGATCACCAGACGAAGCACTCCGTCCTCCTCGAGAAGCTCAGAGTGAGACATCTCAAAGACAGTGCAAAGAGCTCAGAACTCAAGAATAAGGACCAAACAAAGAAGAATTCTTCTTCTTCTACTGGTGAAAATGAGAGTTTTGATGGGGTGGTGGTGAAAAAGAATAAGCTTGTCGGGAGTTTTGAAGAATTGGGTTTGAGTGAAGAGGTTATGGGTTCTGTTAGGGAAATGAGTATTGAAGTTCCCACTGAGATTCAGTGTATTGGTGTTCCTGCTGTCTTGCAAGAGAACAGTGTTGTGTTGGGTTCTCACACTGGCTCTGGCAAAACCCTTGCTTACTTGCTTCCCCTTGTTCAGTTGCTAAGACGGGACGAACAGTTGAATGGAATACAGTTAAAGCCCAGGAGACCTCGTGCTGTTGTGCTATGCCCTACGAGGGAGTTGTGTGAACAGGTTTTTCGAGTTGCGAAATCAATTAGTCATCATGCACGGTTCAGGTGCACAATGGTAAGTGGTGGTGGCCGTATTAGGCCTCAAGAGGATTCACTTAATAACCCCATTGATATGGTAGTTGGTACCCCTGGAAGGATTCTTCAACATATTGAGGAGGGCAACCTGGTGTATGGCGACATCAAATACTTGGTATTGGATGAGGCAGATACAATGTTTGATCGTGGCTTTGGTCCTGATATACGCAAATTTCTGGCCCCATTGAAACATCGTGCATCAAAGTCTGATGGCCTAGGTTTTCAGACCGTCTTGGTAACTGCAACAATGACAAAGGCTGTGCAAAAGCTAGTTGATGAGGAGTTTCAGGGCATTGTACATCTGCGAACATCAACATTGCATAAAAAGATTTCTTCTGCTCGTCACGATTTTATTAAACTTTCGGGTTCTGAGAACAAGCTGGAAGCATTACTTCAGGTACTTGTGCCAAGCCGAGCAAAAGGCAACAAGGTGATGGTTTTTTGCAATACTTTGGACTCTAGCCGTGCAGTGGATCACTACCTTGTTGAAAATATGATTCCTACTGTCAACTACCATGGGGAAGTACCAGCAGAGCAAAGGGTTGAAAACCTCAATAAGTTTAAGAATGACATTGATGATCGTCCAACATTAGTTTGCACAGACTTGGCCGCTAGGGGTCTGGACTTGGATGTAGACCATGTTGTTATGTTTGACTTCCCCTTGAACTCTATCGATTACCTTCATCGGACTGGTAGAACTGCTCGTATGGGTGCAAAAGGGAAAGTAACCAGTTTGGTTACAAAGAAGGACTTGATCTTGGCCACTAGAATAGAGGAGGCAATGAGGAAGAATGAGAGTTTGGAGGCTATCACGAAAGAAGGAGTACGAAGGGATATCGCCAGGACCCAAGTTAATGGGCAGAGTGGGAAGGACAGAAAATTAGTTAAAGTTTCTAAAGTTAAGAACAATCCTGGTGGACGTGCCAGTTTAGGGAATAAAGGATCAGATTTGAAATCCGGAAAAGGATCATCATCGGGAAAATCTATGAAGAAAGGGATTAAGGTTTCAAATTCTGTAAAATCCTCCAGTGCTAATAGCTCGAGAAAAGCTTCTTCAGGGGATAAGCGAACAAGTAAAAGGACCAGTGCCACCAAATCGACAAATTCTAAACTCAGTGTTGTCGGGTTTAGGGGTCGGAACTCATCATCAAACCCCTTGTGA 1863 0.453 MAGATARTLFLSSSSFTRLSHRCNLIPLLTRSKPIINVPPPRFRTFCSVATAPETSDTDHQTKHSVLLEKLRVRHLKDSAKSSELKNKDQTKKNSSSSTGENESFDGVVVKKNKLVGSFEELGLSEEVMGSVREMSIEVPTEIQCIGVPAVLQENSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGIQLKPRRPRAVVLCPTRELCEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLAPLKHRASKSDGLGFQTVLVTATMTKAVQKLVDEEFQGIVHLRTSTLHKKISSARHDFIKLSGSENKLEALLQVLVPSRAKGNKVMVFCNTLDSSRAVDHYLVENMIPTVNYHGEVPAEQRVENLNKFKNDIDDRPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVTKKDLILATRIEEAMRKNESLEAITKEGVRRDIARTQVNGQSGKDRKLVKVSKVKNNPGGRASLGNKGSDLKSGKGSSSGKSMKKGIKVSNSVKSSSANSSRKASSGDKRTSKRTSATKSTNSKLSVVGFRGRNSSSNPL* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3721 620 MobiDBLite consensus disorder prediction 515 620 - -
Ahy15g3721 620 Pfam Helicase conserved C-terminal domain 360 471 IPR001650 -
Ahy15g3721 620 MobiDBLite consensus disorder prediction 596 620 - -
Ahy15g3721 620 MobiDBLite consensus disorder prediction 550 585 - -
Ahy15g3721 620 Gene3D - 346 513 IPR027417 -
Ahy15g3721 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 483 IPR027417 -
Ahy15g3721 620 Pfam DEAD/DEAH box helicase 141 324 IPR011545 GO:0003676|GO:0005524
Ahy15g3721 620 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 117 145 IPR014014 GO:0003724
Ahy15g3721 620 MobiDBLite consensus disorder prediction 78 104 - -
Ahy15g3721 620 Gene3D - 76 336 IPR027417 -
Ahy15g3721 620 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 41 546 - -
Ahy15g3721 620 SMART ultradead3 136 355 IPR014001 -
Ahy15g3721 620 CDD SF2_C_DEAD 348 480 - -
Ahy15g3721 620 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 360 513 IPR001650 -
Ahy15g3721 620 SMART helicmild6 389 471 IPR001650 -
Ahy15g3721 620 CDD DEADc 128 327 - -
Ahy15g3721 620 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 148 335 IPR014001 -
Ahy15g3721 620 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 41 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3721 Ahy-Chr15 160010325 160014525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3721 103 493 Eukaryotic Initiation Factors Gene Family AT3G19760 28.571 5.33e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3721 - - vun:114182370 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3721 15 160010325 160014525 Ahy5g3285 5 114946794 114950641 hybridization