Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3701 ATGGGTCGGTGCCGAGCTGCTTCGCGCCTTGCGGACGATGATCCGAACCTAAGATCCAAGAAAAAAAAGGCTGCTTTGAATGTAGAGAATTTAGACACTTCATCCCCAGATGTGGCAGCTCAAGGAGTAACTGATGGGAAAGGAGCTTTATACCACTGCAATTATTGCAACAAAGATATTTCAAGGATGATTCGCATTAAGTGTGCTGTATGTCAAGATTTTGATCTCTGCATAGAGTGTTTCTCTGTTGGGGCTGAAGTGACACCTCACAAAAGCAATCATCCATATATGATTATGGATAATCTATCTTTTCCCCTTATAACTCCAGATTGGAATGCAGATGAAGAGATGTTACTTTTAGAGGGCATTGAGATGTATGGATTTGGGAATTGGAATGAAGTTGCTGAGTATGTTGGGACAAAAAGCAAATCTCAATGTATTGACCATTATAATGCTATATATATGAATTCACCGTGCTTTCCTCTCCCTGATTTGTCACATGTTATGGGAAAAAACAAAGAGGAACTTCTTGAGATGGCAAAGGGACATGAAGTCAAGAAAGAATGTCCGGCAACTGCAAAGCTTACTCTGAAAGAAGAACCTCCCTTGTCTGAGGGAATAAACTCTGAAGAATCTAATAGGGCAGAAGTCACTAATCCAACATCTATGTTAACCTCAGTATGTGGCAAAACTTACTCAAGTACGATTAAGAAGGCTTCCAATGTGAGCCAGAATGCAGATGGAGTTAAGATGGAAGAATATCAGTCAGATCGGAGCATTGGAGAGAAGAAACCGAAGTTATCTGGCAAAGTTGAGCCTTCTGTGACCGAGTTGAGTGGATACAGTTTTAAGAGAGAGGAATTCGAAGTTGAATATGACAATGATGCAGAGCAAGTATTAGCAGATATGGAATTTAAGGACATCGATACTGAGTCTGAACGTGAAATGAAACTGCATGTGCTCCGTATTTATTCAAGAAGATTAGATGAGCGGAAGCGCAGAAAGAATTTTATACTTGAAAGAAATTTACTTTATCCTGATCCATTTGAGAAAAGTCTCTCTCCTGAGGAGGTTGAAATATGTCAGCGCTATAAGGTCTTCACACGGTTTCACTCGAAAGAAGAGCATATGGAGTTGCTCAAAAATATTATTGAAGAACACAGGCTTATCAAAAGAATACAGGATTTGCAGGAAGCACATACTGCTGGCTATCAAACATCTACAGAGGCTTACAAATTTATCGAACAGAAGAAAAAAGAAGCGGAACGTGTTGTTAAAGAAAATAATCATATTGGTGTTGGTGCTAAGATATTACCAAGACCGAATTATCTCAAAGGAGAACTTGATAGCAACTCACTGGGTCTTCATAAGGATATTACAGCTCCACTTTCTGGGGTGAAGTATCCAGCTGTGGCCATACAGGATATATCAAGATCTCTAGAAGAATGGGATATTAGTGGATTTGCCGGGGCTGAACTGCTGTCTGAATCTGAGATAAATCTTTGTAATGAGATCAGAATACTACCATCACACTATTTCAAAATGCAGCATGTCTTATCATCAGAAATTTCAAAGGGCAACATATCGAAGAAATGTGATGCGCATAGGTTGTTCAAGGTCGAGCCAAGCAAGGTTGATAGAGTTTATGATATGCTTATAAAAAAGGGGATTGCTCCTTCAAATTGA 1686 0.3944 MGRCRAASRLADDDPNLRSKKKKAALNVENLDTSSPDVAAQGVTDGKGALYHCNYCNKDISRMIRIKCAVCQDFDLCIECFSVGAEVTPHKSNHPYMIMDNLSFPLITPDWNADEEMLLLEGIEMYGFGNWNEVAEYVGTKSKSQCIDHYNAIYMNSPCFPLPDLSHVMGKNKEELLEMAKGHEVKKECPATAKLTLKEEPPLSEGINSEESNRAEVTNPTSMLTSVCGKTYSSTIKKASNVSQNADGVKMEEYQSDRSIGEKKPKLSGKVEPSVTELSGYSFKREEFEVEYDNDAEQVLADMEFKDIDTESEREMKLHVLRIYSRRLDERKRRKNFILERNLLYPDPFEKSLSPEEVEICQRYKVFTRFHSKEEHMELLKNIIEEHRLIKRIQDLQEAHTAGYQTSTEAYKFIEQKKKEAERVVKENNHIGVGAKILPRPNYLKGELDSNSLGLHKDITAPLSGVKYPAVAIQDISRSLEEWDISGFAGAELLSESEINLCNEIRILPSHYFKMQHVLSSEISKGNISKKCDAHRLFKVEPSKVDRVYDMLIKKGIAPSN* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3701 561 PIRSF Txn_adaptor_ADA2 39 560 IPR016827 GO:0003713|GO:0006357|GO:0035065
Ahy15g3701 561 Gene3D - 104 156 - -
Ahy15g3701 561 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 559 - -
Ahy15g3701 561 ProSiteProfiles Zinc finger ZZ-type profile. 48 104 IPR000433 GO:0008270
Ahy15g3701 561 ProSiteProfiles SANT domain profile. 106 158 IPR017884 -
Ahy15g3701 561 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 159 IPR017930 -
Ahy15g3701 561 SMART sant 107 156 IPR001005 -
Ahy15g3701 561 Gene3D - 475 558 IPR036388 -
Ahy15g3701 561 CDD SANT 111 151 IPR001005 -
Ahy15g3701 561 ProSitePatterns Zinc finger ZZ-type signature. 53 80 IPR000433 GO:0008270
Ahy15g3701 561 SMART zz_5 47 92 IPR000433 GO:0008270
Ahy15g3701 561 SUPERFAMILY Homeodomain-like 103 157 IPR009057 -
Ahy15g3701 561 SUPERFAMILY Homeodomain-like 478 557 IPR009057 -
Ahy15g3701 561 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 559 IPR034318 GO:0003713|GO:0006357|GO:0035065
Ahy15g3701 561 ProSiteProfiles SWIRM domain profile. 474 561 IPR007526 GO:0005515
Ahy15g3701 561 SUPERFAMILY RING/U-box 51 114 - -
Ahy15g3701 561 Pfam Myb-like DNA-binding domain 110 151 IPR001005 -
Ahy15g3701 561 Pfam Zinc finger, ZZ type 51 91 IPR000433 GO:0008270
Ahy15g3701 561 ProSiteProfiles Myb-like domain profile. 111 154 IPR001005 -
Ahy15g3701 561 Gene3D - 47 99 IPR043145 -
Ahy15g3701 561 CDD ZZ_ADA2 51 99 IPR041983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3701 Ahy-Chr15 159826292 159838068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3701 1 561 EF-hand Containing Proteins AT3G07740 53.578 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy15g3701 Myb_DNA-binding 2.30E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3701 K11314 - gmx:100779424 803.897