Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3668 ATGGAGATGGAGATGCGAAGCATGGAAGATACAGAGATAGCCACAGACATGACTCCATCCCTCGTCCCTCTCACTTTCTCTCTCCACCACTCCAACCTCCACACTCACTGCTCCTCTTGTTTCTCTCTCCTCCCTCTCTCTCCCATTCCCATCACCCCCTTCCTCTACTGCTCTCCTCCCTGCTCCGCCGCCCACCCTTTCCTCCTCCACCATCCCGCCGTCTCTCACTCCTCCGACCTCCGCGCCGCCCTCCTCCTCCTCTCCCACCACCGCCCCTCCGTCACTTCCTCTCGTGTCGCTGGCCTCCTCTCCAACCGCCACAAGCTCACGTGCCACAACAACTCCGACGAAGACGAGGTTTCCGAGAGAATCAGCAGTGGAGTCAGAGCCTTGGCCACTGCAATTACGGAGCTGCGAGGGGAGCTGGAGCCGGACGACGCCGTTTTGGAGGAGGCGGAGTGTGCATTGTGCGCGGTGCTAACGAACGCCGTGGAGGTGCAGGATAAGGAAGGGCGCGCACTGGGAATCGCGGTTTATGGTCCGGCGTTCTCTTGGATCAACCACAGCTGCTCCCCCAATGCCTGCTACCGCTTCATCCTCTCTCCTTCTTCTTCTTCTTCTTCGCAGGAATCCAAGCTTCGAATAGCTCCATCTTCCTTTCGCGGTTCTCCTGATTCACGAATAGATAGTGGGCTTTGTACTATCACTAATCATTTTCAGAAAGAAGAGGAGCAAAACCAAGGCTATGGACCGAGATTGATTGTGAGGAGTATCAAGAGAATAAAAAAGGGACAAGAGATTACCATAGCATACACTGATCTCTTGCAATCTAAGGCAATGCGGCAATTGGATCTATGGTCCAAGTACAGGTTTATCTGCTGTTGCATGCGATGTAGTGTTGTGCCCTTCACATATGTTGATCATGCATTGCAAGATGTGGTCATCACAATCTGCAATTTTCCCAAAACATCTCAGGAAATTTCTGTTTCCGGTTGTGATTTTACTAGTTCAAGCTCCAGCTACAATCTTGTCAGAGACACAGCAGAAAGAAGACTGAATGATTCAGTTGATGATATTATATCTGAGTATCTCATGGCTGGTGATCCTGAGCCTTGCTGTGAGAAACTTGAGAAGATTCTTATGCAGGGTCTGTGCGACGAGTTGGACAATGTTGAAGAAACACCACATTATAAGTTCATGTTGCATCCCCTGCATTACCTCTCTCTAAATGCATACACAACACTGGCTTCGGCATATAAAGTTCGTGCTAGTGATATCTTGTCTACAACTTCTACAATATATCAAAACCAGTTAGAAGCTTTCGACATGAGCAGAACCAGTGCAGCATATTCCTTGTTACTAGCAACTACAGCACATCATCTCTTCAATTCCGAATCCTCACTGATTGCATCTCTTGCAAATTTTTGGACAGGTGCAGGCGAGTCTTTGTTGTATCTTGCCAGAAGTTCAGAATGGAGCAAGTTTTTCAAATCAAGTCTGGTTGCTTCTTCGGTTTCCAAGGTCAAATGTTCCAAGTGTTCATTAATGGATACATTCAGAGCCTATATATGTAATGGTAAAATTAGGAATGATGATTTTGAGAATGCATCAAATGAGTTTCTTGATTGCATCTCCCATGATTCAACACAGAAGGTTTGGAGTTTCCTTGTCAATGGTTGCCGTTTTTTGAGATCGATCAAGGATCCTATGGATTCGGGCTGGTTAGTCTCTACCAGCAATTCCAGAGCAACGGATCCCGGAGCTCTGGCTAAGAAAAAATCTGAAGTATGTTACTTACACGAATCTGGAAATAGTATCCAGACCTGTGAAGAACAAACTTGCAATGAGAATGCAAGGGTACACATTTTTGAGCTGGGTGTACACTGCTTAGCATATGGAGGATTATTGGCTGCTATATGTTATGGTCACCATTCCCATTTGGCTTCATATGTTGAACAGATTCTGGATGACAAAAACAATCTTATATTATAA 1992 0.4649 MEMEMRSMEDTEIATDMTPSLVPLTFSLHHSNLHTHCSSCFSLLPLSPIPITPFLYCSPPCSAAHPFLLHHPAVSHSSDLRAALLLLSHHRPSVTSSRVAGLLSNRHKLTCHNNSDEDEVSERISSGVRALATAITELRGELEPDDAVLEEAECALCAVLTNAVEVQDKEGRALGIAVYGPAFSWINHSCSPNACYRFILSPSSSSSSQESKLRIAPSSFRGSPDSRIDSGLCTITNHFQKEEEQNQGYGPRLIVRSIKRIKKGQEITIAYTDLLQSKAMRQLDLWSKYRFICCCMRCSVVPFTYVDHALQDVVITICNFPKTSQEISVSGCDFTSSSSSYNLVRDTAERRLNDSVDDIISEYLMAGDPEPCCEKLEKILMQGLCDELDNVEETPHYKFMLHPLHYLSLNAYTTLASAYKVRASDILSTTSTIYQNQLEAFDMSRTSAAYSLLLATTAHHLFNSESSLIASLANFWTGAGESLLYLARSSEWSKFFKSSLVASSVSKVKCSKCSLMDTFRAYICNGKIRNDDFENASNEFLDCISHDSTQKVWSFLVNGCRFLRSIKDPMDSGWLVSTSNSRATDPGALAKKKSEVCYLHESGNSIQTCEEQTCNENARVHIFELGVHCLAYGGLLAAICYGHHSHLASYVEQILDDKNNLIL* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3668 663 Gene3D - 84 163 - -
Ahy15g3668 663 Pfam SET domain 164 271 IPR001214 GO:0005515
Ahy15g3668 663 Gene3D SET domain 23 198 IPR046341 -
Ahy15g3668 663 PANTHER PROTEIN SET DOMAIN GROUP 41 3 658 - -
Ahy15g3668 663 ProSiteProfiles SET domain profile. 118 272 IPR001214 GO:0005515
Ahy15g3668 663 Gene3D - 36 83 - -
Ahy15g3668 663 CDD SET_SMYD 141 298 - -
Ahy15g3668 663 Gene3D SET domain 250 298 IPR046341 -
Ahy15g3668 663 SUPERFAMILY SET domain 175 295 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3668 Ahy-Chr15 159511552 159515905 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy15g3668 SET 6.20E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3668 - - ahf:112802999 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3668 15 159511552 159515905 Ahy5g3252 5 114558185 114562242 hybridization