Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3659 ATGCAGCTTGAGGACTCATCAATCCTCTCTCTCATCAATAATAAGCCAGTTATGGCGGTTACGGCGGTGGCGGCACCGGATGAAGATGGTGTCAAGGGTGGTGGTGGTGAAGTGGTGGTTGGTATGGAAGAAGAAGAAGAAGAAGTAGTGAATGCAACAAATTCAAGTGAAGAGAATAATAGTAATAATAAGGGAAGAGAAGAAGAAGAAGGTGGTGGTGGTGGTCGCGACGACGGCGGCGATAAGATGAGCTTTGGTGGAAACCGGTGGCCACGGCAAGAAACTTTGGCTCTCTTAAAGATAAGGTCAGATATGGATTCAGTGTTTCGTGATTCAACTCTCAAAGGTCCACTATGGGAAGAAGTTTCAAGGAAATTAGGAGAAATTGGATACAAGAGAAGTGCAAAGAAATGCAAAGAAAAATTTGAGAATGTGTATAAGTATCACAAGAGAACCAAAGAAGGTAGAACTGGAAAATCTGAAGGAAAAACCTACAAGTTCTTTGATCAATTACAAGCACTTGAGAATCACAATCAATTCAATAATACACACCCTCCTCCAAAATCATCACAACCTCTTTTGCCAACAAACCCTACTTTAGTAAATTCTTCGGCACTGCCGTCAACAACTGTGACTGCAGCAGTCACAACCAACAACATAAGTAGTACTACTTTTGCACCACATTCCTTTCCTAATAACAACAGCATGAACCTTTTTTCATCACCATCGTCGTCACCATCGTCGTCAACAGCTTCAGATGAAGGGTTGGAAGAGAGGTACAAGAAGAAGAGGAAATGGAAGGACTACTTCAGGAAGCTGACTAGGCAAGTCCTTGCAAAGCAAGAGGAGATGCAAAATAGGTTCTTGGAAGCCATAGATAGAAGGGAAAGAGAAAGAGTAGCACAAGAAGAAGCTTGGAGGTTGCAAGAGATGTCAAGAATCGCCAATGAACACGACGTACTTGTGCAAGAGAGGTCAACAGCTGCAGCCAAAGATGCAGCTGTTATCGCTCTTTTGCACAAGTTATCCGGCCACGAAACACAATCACCACAGACACAGACACAGATACAGAAACAACAAACAATTAAGGCAAAGAATAGTAGTAGTAGAGAAATAGTTGAAAGAATGAGTTGTTCTTCGTCTTCAAGGTGGCCAAAGGGTGAAGTTCATGCATTGATAAGGCTAAGAACAAGTCTTGATTCAAAGTACATGGAGAATGGACCAAAAGCTCCATTATGGGAGGATATATCAGGTGGAATGCAGAGATTAGGGTACAACCGAAGTGCGAAGAGATGCAAAGAGAAATGGGAGAATATAAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAGCAAAGGCGTGAAGATAGCAAGACTTGTCCCTATTTTCATGAGCTTGAAGCTCTTTACAAAGACAAGATTAGCAACAACACCTCCTTTGGAAGTTTCCAGAATAATATGGAGCCTTTGATGGTTCAGCCTGAGCAACAATGGAGGCCACCACCTGAATCCAACAAGGACAACAATAATGAATCAAATGAAGAAGAAGAAGAAGAAGAGTACGATGATGATGGTGTTGAAGAAGAAGAAGAAGATAGTGTTGGAGAAGAAGAAGAAGGATTGAACCGTTATCAGATTGTGACAAATAAAGTTTCATCAGTGGACACAGTTGAATAA 1677 0.4162 MQLEDSSILSLINNKPVMAVTAVAAPDEDGVKGGGGEVVVGMEEEEEEVVNATNSSEENNSNNKGREEEEGGGGGRDDGGDKMSFGGNRWPRQETLALLKIRSDMDSVFRDSTLKGPLWEEVSRKLGEIGYKRSAKKCKEKFENVYKYHKRTKEGRTGKSEGKTYKFFDQLQALENHNQFNNTHPPPKSSQPLLPTNPTLVNSSALPSTTVTAAVTTNNISSTTFAPHSFPNNNSMNLFSSPSSSPSSSTASDEGLEERYKKKRKWKDYFRKLTRQVLAKQEEMQNRFLEAIDRRERERVAQEEAWRLQEMSRIANEHDVLVQERSTAAAKDAAVIALLHKLSGHETQSPQTQTQIQKQQTIKAKNSSSREIVERMSCSSSSRWPKGEVHALIRLRTSLDSKYMENGPKAPLWEDISGGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFHELEALYKDKISNNTSFGSFQNNMEPLMVQPEQQWRPPPESNKDNNNESNEEEEEEEYDDDGVEEEEEDSVGEEEEGLNRYQIVTNKVSSVDTVE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3659 558 CDD GT1 88 153 - -
Ahy15g3659 558 ProSiteProfiles Myb-like domain profile. 382 440 IPR001005 -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 346 370 - -
Ahy15g3659 558 SMART sant 380 442 IPR001005 -
Ahy15g3659 558 SMART sant 86 148 IPR001005 -
Ahy15g3659 558 PANTHER - 42 546 - -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 493 558 - -
Ahy15g3659 558 Pfam Myb/SANT-like DNA-binding domain 88 174 IPR044822 -
Ahy15g3659 558 Pfam Myb/SANT-like DNA-binding domain 382 469 IPR044822 -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 236 253 - -
Ahy15g3659 558 ProSiteProfiles Myb-like domain profile. 82 146 IPR001005 -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 236 258 - -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 493 507 - -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 26 89 - -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 510 537 - -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 178 204 - -
Ahy15g3659 558 MobiDBLite consensus disorder prediction 61 77 - -
Ahy15g3659 558 Coils Coil 42 62 - -
Ahy15g3659 558 CDD GT1 382 447 - -
Ahy15g3659 558 Gene3D - 384 445 - -
Ahy15g3659 558 Gene3D - 90 151 - -
Ahy15g3659 558 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 42 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3659 Ahy-Chr15 159418942 159421656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3659 80 497 Trihelix Transcription Factor Family AT1G76890 49.896 2.08e-139 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy15g3659 Myb_DNA-bind_4 4.30E-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3659 - - ahf:112802983 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3659 15 159418942 159421656 Ahy5g3240 5 114404011 114406920 hybridization
Ahy15g3659 15 159418942 159421656 Ahy9g2784 9 116877893 116881114 PCT
Ahy9g2784 9 116877893 116881114 Ahy15g3659 15 159418942 159421656 PCT