Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3657 ATGGAAGGGAATTTGCCACAGGGTGGTACTGTTCAAGGTGGAGCTTCTTTTGGTGGTTTTGATTTGCCTGCTTCAATGCGGCTTCATCACCAATCACAGCATGCGCCGCATGCCATGACCCAGCATCAAAATCATCCTTGCCATGGGTCTTCGGGGAAGTCCTCGAATTTTCCACTTACAATGTGTGATCAGACTATGTCAATGGCTGAGTTTGGTAAGGGAGATAGAAACAAAAACTCATTAAGCGATGAAGAAGAGCCGAGTTTGACTGAAGATGGTGGTGAGGGTCATCATGAAGCAGGCAGAACGAAGAAGGGGTCGCCTTGGCAACGGATCAAGTGGACCGATAAGATGGTGAAGCTTATGATAACAGCTGTTTCATATATAGGCGAAGATTCGACTTCTGATGGTGCCGGAAGAAGAAAATTCATGGTCCTTCAAAAAAAGGGCAAATGGAAGACTATTTCCAAGGCCATGGCTGAAAGGGGTTATCATGTTTCCCCTCAGCAATGTGAGGATAAATTCAATGATCTCAATAAACGCTATAAAAGGCTTAATGAAATGCTTGGCAGGGGTACTTCTTGTCAGGTTGTTGAAAATCCGGCCCTGTTGGATGTAATTGACTATCTTTCTGAGAAAGAAAAGGATGATGTTCGGAAAATACTAAACTCAAAACAGCTTTTTTATGAGGAGATGTGTTCTTACCATAATAATAATAGATTGCATTTACCCCATGACATTGCATTGCAACGATCACTGCAGCTAGCTCTCCGAAGTAGAGATGATCATGACGAAGATGATCAAGATATGGAAACTGATGATCATGATGAATTTGAAGAGAATCATGCTTCCCATGGGGATTGCAGAGGAATCCACGGGGCATTAGTCGGACCTATGAAGAAATTAAAACAAGGACAAGACCAAGAAGATTCTTCTACTTTTGGGAATTCTCTAAATTGTCAAGAATATAACAAAAGTTTGCACACTCATGGACAGATGGTCCAATCAGATGTAAATCAAGCTTTACCTGAAAACTTGAGAGCAGCATGGTTACAGAAGCAATGGGTTGAGTCTCGCGCAATTCAGTTAGAAGAACAGAAATTACAGATACAGATCGAGATGTTGGAAGTAGAGAAGCAGAGATTCAAGTGGCAGAAGTTCAGTAAGAAGAAAGATCGGGAGTTGGAGAAGTTGAAGCTGGAGAATGAAAGGATGAAGCTTGAGAACGAACGTCTTGCTTTAGAGCTGAAGCGAAAGGAATTGGTTTCTGGTTTGAACTAG 1281 0.4208 MEGNLPQGGTVQGGASFGGFDLPASMRLHHQSQHAPHAMTQHQNHPCHGSSGKSSNFPLTMCDQTMSMAEFGKGDRNKNSLSDEEEPSLTEDGGEGHHEAGRTKKGSPWQRIKWTDKMVKLMITAVSYIGEDSTSDGAGRRKFMVLQKKGKWKTISKAMAERGYHVSPQQCEDKFNDLNKRYKRLNEMLGRGTSCQVVENPALLDVIDYLSEKEKDDVRKILNSKQLFYEEMCSYHNNNRLHLPHDIALQRSLQLALRSRDDHDEDDQDMETDDHDEFEENHASHGDCRGIHGALVGPMKKLKQGQDQEDSSTFGNSLNCQEYNKSLHTHGQMVQSDVNQALPENLRAAWLQKQWVESRAIQLEEQKLQIQIEMLEVEKQRFKWQKFSKKKDRELEKLKLENERMKLENERLALELKRKELVSGLN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3657 426 MobiDBLite consensus disorder prediction 258 287 - -
Ahy15g3657 426 MobiDBLite consensus disorder prediction 76 109 - -
Ahy15g3657 426 Coils Coil 358 380 - -
Ahy15g3657 426 PANTHER F16F4.11 PROTEIN-RELATED 1 423 - -
Ahy15g3657 426 Gene3D - 114 184 - -
Ahy15g3657 426 MobiDBLite consensus disorder prediction 34 63 - -
Ahy15g3657 426 PANTHER F16F4.11 PROTEIN 1 423 - -
Ahy15g3657 426 Coils Coil 388 422 - -
Ahy15g3657 426 MobiDBLite consensus disorder prediction 1 109 - -
Ahy15g3657 426 Pfam Myb/SANT-like DNA-binding domain 113 235 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3657 Ahy-Chr15 159378632 159381331 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy15g3657 Myb_DNA-bind_4 1.00E-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3657 - - pvu:PHAVU_007G079600g 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3657 15 159378632 159381331 Ahy5g3238 5 114366189 114368419 hybridization
Ahy15g3657 15 159378632 159381331 Ahy19g2814 19 150181415 150184240 PCT
Ahy15g3657 15 159378632 159381331 Ahy9g2782 9 116825001 116827176 PCT
Ahy19g2814 19 150181415 150184240 Ahy15g3657 15 159378632 159381331 PCT
Ahy9g2782 9 116825001 116827176 Ahy15g3657 15 159378632 159381331 PCT