Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3651 ATGATTTGTAACTTTAAAAAAGAGGCTTCCCTCAATCACACCAACAAACAAGTCTTTCATAGCAACAACAACAATGACCTTGAGCAACAAGCAACAACAACAACACCACTTGAGATCATTGAAACCAAGAAGGAGGAAGAAGAAGAAGAAGATTTCTTTGACTACTCAAGAAGATCTCAATGGCTACGTGCTGCTGTTCTTGGAGCCAATGATGGGTTGGTCTCAACAGCATCACTAATGATGGGTGTTGGAGCAGTGAAACAAGACATCAAAGCCATGATCCTCACCGGTTTTGCAGGCTTAGTTGCCGGCGCTTGCAGCATGGCCATAGGTGAGTTTGTGTCTGTCTACTCGCAACTCGACGTTGAACTCGCTCAAATGAAGAGGGACAAAGAAAGAGGAAACAACAACAACAACAGCAACAGCAACAATTCTGATAAAGAAGAAGAAGAAGAAGAAGAAAGATTGCCAAACCCTTTACAAGCAGCAGCAGCATCAGCTTTGGCATTTTCTATTGGTGCAATGGTGCCATTGCTTTCTGCTTCTTTCATAAGAGAATATAAGGTGAGGCTTGGTGTGGTTGTGGCTGCTGTAACCTTTGCTTTGGTTCTGTTTGGTTGGTTAGGTGCTGTTCTTGGTAAGGTTCCTGTTTTTAGGTCTTCTTTAAGGGTTCTTCTTGGTGGTTGGATGGCCATGACTATTACTTTTGCTCTTACCAAGTTGATAGGATCAAGTGCTCTTTAA 744 0.4261 MICNFKKEASLNHTNKQVFHSNNNNDLEQQATTTTPLEIIETKKEEEEEEDFFDYSRRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDVELAQMKRDKERGNNNNNSNSNNSDKEEEEEEERLPNPLQAAAASALAFSIGAMVPLLSASFIREYKVRLGVVVAAVTFALVLFGWLGAVLGKVPVFRSSLRVLLGGWMAMTITFALTKLIGSSAL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3651 247 Pfam VIT family 62 141 IPR008217 GO:0005384|GO:0030026
Ahy15g3651 247 Pfam VIT family 151 239 IPR008217 GO:0005384|GO:0030026
Ahy15g3651 247 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 27 244 - -
Ahy15g3651 247 CDD Nodulin-21 60 216 - -
Ahy15g3651 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 244 IPR008217 GO:0005384|GO:0030026
Ahy15g3651 247 Coils Coil 117 137 - -
Ahy15g3651 247 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3651 Ahy-Chr15 159347194 159350258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3651 46 247 Nodulin-like Gene Family AT3G43660 67.822 7.90e-99 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3651 15 159347194 159350258 Ahy5g3232 5 114334991 114337519 hybridization
Ahy15g3651 15 159347194 159350258 Ahy19g2817 19 150214882 150216045 PCT
Ahy15g3651 15 159347194 159350258 Ahy9g2779 9 116801059 116802050 PCT
Ahy19g2817 19 150214882 150216045 Ahy15g3651 15 159347194 159350258 PCT
Ahy9g2779 9 116801059 116802050 Ahy15g3651 15 159347194 159350258 PCT