Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3642 ATGGGATTTAGAAACCTGGGACTACTTGGATCATTTGCCAAAGAGGGGTTGGAAAAAGCATTCTCTCTTGGAAAGTTCTTCTGTTTTCTACATGTCACCGACACCTATTTGGTCACGTTTGTTGTGACATCTGGTCCCAGCATGCTTCCCACAATAGATTTGATCCCAACAATGTTTTTCGGTGAAAGGATCTCAACTAGATTTGGTAAAGTTACTTGTGGAGATATTGTGATTATTCGCTCCCCTCAAAACCCTAGGAAGCTTCTGGCTAAACGATTGGTTGGAATGGAGGATGATACTGTTACATACATTTCTAACCCTGATGAGCCTGATAAGCAGGAAACTATTGTGGTTCCAAAGGGTCACGTTTGGATACAGGGTGATAATGCATATAAATCCAATGATTCAAGGAATTTTGGTGCTGTTCCTTATGGACTTATTCAACACAGGCTATTTTGGAGGGTATGGCCAATCAAAGGTTTTGGACCTTTCTGGAAACACTGA 504 0.4127 MGFRNLGLLGSFAKEGLEKAFSLGKFFCFLHVTDTYLVTFVVTSGPSMLPTIDLIPTMFFGERISTRFGKVTCGDIVIIRSPQNPRKLLAKRLVGMEDDTVTYISNPDEPDKQETIVVPKGHVWIQGDNAYKSNDSRNFGAVPYGLIQHRLFWRVWPIKGFGPFWKH* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3642 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Ahy15g3642 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Ahy15g3642 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Ahy15g3642 167 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 166 - -
Ahy15g3642 167 Gene3D Umud Fragment, subunit A 33 165 - -
Ahy15g3642 167 CDD S26_SPase_I 40 148 IPR019533 GO:0004252|GO:0006465
Ahy15g3642 167 Pfam Signal peptidase, peptidase S26 28 103 IPR019533 GO:0004252|GO:0006465
Ahy15g3642 167 Pfam Signal peptidase, peptidase S26 113 156 IPR019533 GO:0004252|GO:0006465
Ahy15g3642 167 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 166 - -
Ahy15g3642 167 SUPERFAMILY LexA/Signal peptidase 35 165 IPR036286 -
Ahy15g3642 167 ProSitePatterns Signal peptidases I signature 3. 123 136 IPR019758 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3642 Ahy-Chr15 159237252 159243712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3642 48 164 MADS-box Gene Family AT1G29960 52.137 7.61e-42 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3642 K09647 - csin:114265272 218.779