Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3631 ATGGCAGATCTTGCTAGCATAGGGAATGCCGACCGTGACATCGACCAGGCATTGGTTGCTTTGAAAAGGGGTTCTCAATTACTTAAATATGGTCGTAAGGGAAAGCCCAAGTTTTGTCCATTTAGACTTTCCAATGATGAATCAACTTTAATCTGGATTTCTAGTAGTGAAGAAAGACGTCTGAAGCTGTCTTCTGTCTCAAGAATTATTCCTGGGCAAAGAACTGCTGTTTTTCAACGTTACCTGCGTCCTGTGAAGGACTATTTATCTTTTTCACTAATTTATAATAACGGAAAGCGGTCCCTTGATTTGATTTGCAAAGATAAAGTTGAGGCAGAGGCGTGGATTGCTGGTCTTAAAGCACTGATAACTTCTGGTCGAGGTGGTCGATCCAAAATTGATGGATGGAGTGATGGTGGCCTCAATTTTGATGATAGTAGAGATCTGACATCAAATAGTGCAAGTGAAAGTTCAGCGAGTACTTCCCTAGACATCAGTTCTCCTGACATTCCTGTGAGTCTTCTGAACACTTCACCAAAGACATTCCGACCTGACAATACCCTGAATTCTGAGAAATCACATGCACCATCAGACCCAATAAATATGCAAGTAAAAGGATCTAGTTCAGATACTTTTCGTGTTAGTGTTTCAAGTGCTCCTAGCACATCCAGTCATGGATCTGCACCAGATGACTATGAAGCTCTAGGGGATGTATACATATGGGGTGAGGTTATCTGTGAAAACGTTGTGAAAGTTGGTGCTGATAAAAGTATCAATTATTTCAGCCCGAGAGCAGATGTGCTTCTACCAAGACCACTTGAATCCAATGTAGTTTTAGATGTGCATCATATAGCATGTGGCGTTAGACATGCTTCTCTAGTCACCAGACAAGGTGAAGTTTTTACATGGGGAGAAGAATCAGGAGGACGCCTTGGCCATGGTGTTGGGAAGAACGTGGTTCAACCTCGCCTTGTCGAAGCGTTAGCTTCTACAACCATTGATTTTGTTGCCTGTGGAGAGTTCCATTCTTGTGCTGTAACAATGGCCGGGGAACTATATACATGGGGTGATGGTACTCATAATGCTGGGCTTCTTGGTCATGGCACTGATGTTAGTCATTGGATACCAAAGAGGATTGCTGGTCCATTAGAGGGACTTCAAGTTGCTTTCGTCGCTTGTGGTCCATGGCACACGGCCTTGATAACTTCTACTGGGCAACTCTTTACGTTTGGTGATGGAACATTCGGTGTGTTGGGCCATGGAGACAGGGAAAATGTTTCATATCCTAGAGAAGTAGACTCCTTATCAGGGTTGAGGACCATAGCTGTTGCATGTGGAGTGTGGCATACTGCAGCAGTTGTAGAGGTTATTGTGACACAATCCAGTTCGAGTATATCATCTGGTAAATTGTTTACTTGGGGTGATGGAGACAAAAATCGCCTCGGACATGGGGATAAGGAGGCACGACTTAAACCAACTTGTGTTTCTGCGCTTATCGACTACAATTTTCATAAAATTGCATGCGGGCACAGTTTGACTGTGGGTCTGACAACATCTGGACGTGTTTTTACGATGGGAAGCACTGTTTATGGTCAGCTTGGGAATCCCCAGTCTGATGGGAAGCTTCCATGCTTGGTCGAAGACAAGATTTCCGTGGAATCGATTGATGAAATTGCATGTGGTGCATATCATGTTGCCGTTTTAACATCAAAAAATGAAGTTTTTACTTGGGGGAAGGGTGCAAATGGGAGATTGGGTCATGGAGATGTCGAAGATCGAAAAATACCTACTTTGGTTGAAGCATTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTACTCCGCTGCCATATGCCTTCATAAGTGGGTATCCGGTGCCGAGCAGTCTCAATGCTCGGCTTGTAGACAGGCATTTGGGTTCACTAGAAAGAGGCACAATTGTTATAATTGTGGACTTGTACATTGCCATTCATGCAGCTCACGGAAAGCATTAAGGGCGGCCTTGGCTCCAAATCCCGGCAAGCCTTATCGAGTTTGTGATTCTTGTTTTGCAAAACTGAACAAGGTTGCAGAAGCTAGCAACAGTAACCGGAGAAATACTCTGCCTCGTCTGTCAGGTGAAAACAAAGACAGGTTGGAAAAATCAGACCTGAAATTGTCAAAAGCACTGGTTCCTTCCAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAAGGGAAGAAAGCAGATACGTTCTCGCTTGTTCGCACCTCACAAGCACCTTCATTGCTACAGTTGAAAGATGTTGTCTTGGCAACTGCTGTTGATCTGAAGCGTACAGCTCCTAGACCGGTGGTTGCACCTTCTGGAGTAAGTTCCAGGTCTGTGTCACCTTTCTCTAGAAGACCAAGCCCCCCTCGATCGGCTACACCTATTCCAACAACATCGGGACTTTCCTTCTCCAAGAGCATTGCTGATAGTTTGAAGAAAACAAATGAACTTTTAAATCAGGAAGTGCAAAAGTTACGTTCTCAGGTTGAAAGCCTGAAACAGAGATGTGAATTGCAAGAATTAGAGCTTCAGCGGTCAAACAAAAAGACTCAAGATGCTATGGCAATGGCTGCTGAGGAATCTGCTAAATGTAAAGCTGCAAAAGAAGTTATAAAGTCACTTACGGCACAGCTCAAAGGTTTTGCTGAGAAGCTCCCACCTGGAGCTTACGATGCCGAGAACATCAAACCGGCTTACCTACCAAACAGTATTGAGCCAAATGGTATCCACCTTCCAGATTCAAATGGTGGGCACCACTCGAGGGCCGAATCAATCAGTGGCTCTAGTTTGGCCTCTACAGCATTCGAATCCTCTCTGCTCAATAGAACTGTGGGGAACTTTCCAGGAACCTATGGATCTACTCTGGACCAGCAAAACCGAGCCAGTGTGACGTCCAATGGTTCAGACAACTATCCAGATGCTAGATTGTCAAATGGTGGCGGCAGCATGTCTGATACTGTTGACGGGAGGGATTCGGGGAATTTCCATGATGACGAGAGTGGTTTAAGATCAAGGAATGCAGGACTGTCTACTAATAGCAATCAGATTGAGGCAGAATGGATTGAACAGTATGAACCTGGTGTCTATATAACACTTGTTGCGCTGCGCGACGGAACAAGAGATTTGAAGCGAGTTCGTTTCAGCCGGAGAAGATTCGGAGAGCATCAAGCAGAGACTTGGTGGTCAGAGAACCGGGACAAGGTATACGAAAGGTACAATGTTCGTAGCGCAGACAAGTCTTCCAACCAACCGGGGGCGCCACATAGGACAGAAGGTGCTGGTTCTCTTGTTTCCCAATCATAG 3351 0.4482 MADLASIGNADRDIDQALVALKRGSQLLKYGRKGKPKFCPFRLSNDESTLIWISSSEERRLKLSSVSRIIPGQRTAVFQRYLRPVKDYLSFSLIYNNGKRSLDLICKDKVEAEAWIAGLKALITSGRGGRSKIDGWSDGGLNFDDSRDLTSNSASESSASTSLDISSPDIPVSLLNTSPKTFRPDNTLNSEKSHAPSDPINMQVKGSSSDTFRVSVSSAPSTSSHGSAPDDYEALGDVYIWGEVICENVVKVGADKSINYFSPRADVLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALASTTIDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVDSLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKISVESIDEIACGAYHVAVLTSKNEVFTWGKGANGRLGHGDVEDRKIPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCFAKLNKVAEASNSNRRNTLPRLSGENKDRLEKSDLKLSKALVPSNMDLIKQLDSKAAKQGKKADTFSLVRTSQAPSLLQLKDVVLATAVDLKRTAPRPVVAPSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSIADSLKKTNELLNQEVQKLRSQVESLKQRCELQELELQRSNKKTQDAMAMAAEESAKCKAAKEVIKSLTAQLKGFAEKLPPGAYDAENIKPAYLPNSIEPNGIHLPDSNGGHHSRAESISGSSLASTAFESSLLNRTVGNFPGTYGSTLDQQNRASVTSNGSDNYPDARLSNGGGSMSDTVDGRDSGNFHDDESGLRSRNAGLSTNSNQIEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENRDKVYERYNVRSADKSSNQPGAPHRTEGAGSLVSQS* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3631 1116 MobiDBLite consensus disorder prediction 966 1005 - -
Ahy15g3631 1116 Pfam Pleckstrin homology domain 16 123 IPR001849 -
Ahy15g3631 1116 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 468 519 IPR000408 -
Ahy15g3631 1116 Pfam FYVE zinc finger 624 690 IPR000306 GO:0046872
Ahy15g3631 1116 Pfam Regulator of chromosome condensation (RCC1) repeat 350 401 IPR000408 -
Ahy15g3631 1116 Pfam Regulator of chromosome condensation (RCC1) repeat 519 568 IPR000408 -
Ahy15g3631 1116 Pfam Regulator of chromosome condensation (RCC1) repeat 405 453 IPR000408 -
Ahy15g3631 1116 Pfam Regulator of chromosome condensation (RCC1) repeat 573 620 IPR000408 -
Ahy15g3631 1116 Pfam Regulator of chromosome condensation (RCC1) repeat 298 346 IPR000408 -
Ahy15g3631 1116 Pfam Regulator of chromosome condensation (RCC1) repeat 467 514 IPR000408 -
Ahy15g3631 1116 SUPERFAMILY PH domain-like 13 123 - -
Ahy15g3631 1116 CDD FYVE_like_SF 633 686 - -
Ahy15g3631 1116 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 298 349 IPR000408 -
Ahy15g3631 1116 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 520 571 IPR000408 -
Ahy15g3631 1116 SUPERFAMILY FYVE/PHD zinc finger 624 701 IPR011011 -
Ahy15g3631 1116 CDD PH_PLC_plant-like 12 124 - -
Ahy15g3631 1116 PRINTS Chromosome condensation regulator RCC1 signature 407 421 IPR000408 -
Ahy15g3631 1116 PRINTS Chromosome condensation regulator RCC1 signature 350 366 IPR000408 -
Ahy15g3631 1116 PRINTS Chromosome condensation regulator RCC1 signature 509 527 IPR000408 -
Ahy15g3631 1116 PRINTS Chromosome condensation regulator RCC1 signature 300 316 IPR000408 -
Ahy15g3631 1116 PRINTS Chromosome condensation regulator RCC1 signature 391 407 IPR000408 -
Ahy15g3631 1116 PRINTS Chromosome condensation regulator RCC1 signature 567 588 IPR000408 -
Ahy15g3631 1116 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 405 456 IPR000408 -
Ahy15g3631 1116 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 572 623 IPR000408 -
Ahy15g3631 1116 MobiDBLite consensus disorder prediction 1091 1116 - -
Ahy15g3631 1116 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 443 453 IPR000408 -
Ahy15g3631 1116 SUPERFAMILY RCC1/BLIP-II 236 625 IPR009091 -
Ahy15g3631 1116 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 13 1096 - -
Ahy15g3631 1116 Gene3D - 187 460 IPR009091 -
Ahy15g3631 1116 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 13 1096 - -
Ahy15g3631 1116 Pfam Transcription factor BRX N-terminal domain 875 910 IPR027988 -
Ahy15g3631 1116 ProSiteProfiles BRX domain profile. 1034 1089 IPR013591 -
Ahy15g3631 1116 MobiDBLite consensus disorder prediction 922 941 - -
Ahy15g3631 1116 MobiDBLite consensus disorder prediction 966 1026 - -
Ahy15g3631 1116 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 391 401 IPR000408 -
Ahy15g3631 1116 MobiDBLite consensus disorder prediction 783 817 - -
Ahy15g3631 1116 Gene3D - 461 629 IPR009091 -
Ahy15g3631 1116 SMART fyve_4 622 691 IPR000306 GO:0046872
Ahy15g3631 1116 Gene3D - 13 128 IPR011993 -
Ahy15g3631 1116 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 630 701 IPR013083 -
Ahy15g3631 1116 MobiDBLite consensus disorder prediction 170 206 - -
Ahy15g3631 1116 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 350 404 IPR000408 -
Ahy15g3631 1116 Coils Coil 824 865 - -
Ahy15g3631 1116 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 628 690 IPR017455 -
Ahy15g3631 1116 Pfam Transcription factor regulating root and shoot growth via Pin3 1033 1088 IPR013591 -
Ahy15g3631 1116 Coils Coil 873 893 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3631 Ahy-Chr15 159068562 159076454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3631 1035 1099 Major Intrinsic Protein MIP AT1G31880 50.769 1.16e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3631 - - adu:107490830 2103.56