Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3604 ATGAGTAATGAGGAGGATTGGGATCTCTTTGCCATAGTTAGAAGCTGCAAAGCTGCAAACAACACTGCACAAACTCCACAAGACACAACAACAAAAACTAGTAGTAATAGCATCATGTCTACTTCTTCTACAACTTGCTTGGCCACTACTACTATCACTGCAGAACAAAATGATGGTCCATTTTCTTCTAACAATTTTGTGCAACCCAGGACCAATGGTTTCCAAGAGTTAGAACAATTGCTCAATACCTTTAACCCCACCATCACCACCACCACCACTACCACTAGTGCCCATGGCATCAATTCTAATAATCCTCTCACTTTTCCTCATTTCATTGCACTGCCATCCACCCTTGGAGCCTCCACTTCTGGTTTTGATGATAGATTCCACCACCACCAACAACATCAACAAAAGCAGCATAATCTACTACAGGTTCAAGTTCCCCAAACTAGTACAACTACTTCTCTGACTTTATTACCAAGCTCAGAATCACAATCACAATCACAAACGCAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAAAGAATGGTATGCCATGTAACCGCAGATAACCTCTCATCAGATTTGTGGGCATGGCGTAAATATGGCCAAAAACCCATCAAGGGTTCCCCATATCCAAGAAACTATTACAGATGCAGCAGCTGCAAAGGTTGTGTAGCAAGAAAGCAAGTAGAGCGAAGCTTATCAGACCCCACCATGTTTGTTGTAACTTACACCGGAGAACACAAGCACGCTAAACCGGCTCACCGGAACTCACTCGCCGGAAGTACCCGGAAACCATCCACGCCTCGGTTAGCTGAGACCCAAGAAAATAATGATACTAAGAATCCTAATAATAATAACAAAAATAATAATCCTGATGAGAAGGCTCAGAATAGCAGCACCACAACGAAAGAGCAGAACGCTGAACCGCCGGAAATTGAACAAGAAATGGATGATTCTTCATGTGAAGACAGTGATGATGATGGTGTCTTGATTCCCAACAGCACTGCTGCAATGTCGGATGCAGTGTTCTTGGGAAGCAGCTCCGCCGCTGAAACATGGCACTGCGACGGTGGATTTGAGAATAGGTCCGATCCGGACGGTCCAAGTAATCGGATCTAA 1131 0.4394 MSNEEDWDLFAIVRSCKAANNTAQTPQDTTTKTSSNSIMSTSSTTCLATTTITAEQNDGPFSSNNFVQPRTNGFQELEQLLNTFNPTITTTTTTTSAHGINSNNPLTFPHFIALPSTLGASTSGFDDRFHHHQQHQQKQHNLLQVQVPQTSTTTSLTLLPSSESQSQSQTQTPRSRKRKSQQKRMVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCVARKQVERSLSDPTMFVVTYTGEHKHAKPAHRNSLAGSTRKPSTPRLAETQENNDTKNPNNNNKNNNPDEKAQNSSTTTKEQNAEPPEIEQEMDDSSCEDSDDDGVLIPNSTAAMSDAVFLGSSSAAETWHCDGGFENRSDPDGPSNRI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3604 376 MobiDBLite consensus disorder prediction 250 338 - -
Ahy15g3604 376 MobiDBLite consensus disorder prediction 149 185 - -
Ahy15g3604 376 MobiDBLite consensus disorder prediction 315 329 - -
Ahy15g3604 376 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 349 IPR044810 GO:0003700
Ahy15g3604 376 MobiDBLite consensus disorder prediction 20 39 - -
Ahy15g3604 376 SMART WRKY_cls 195 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy15g3604 376 MobiDBLite consensus disorder prediction 263 311 - -
Ahy15g3604 376 SUPERFAMILY WRKY DNA-binding domain 190 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy15g3604 376 MobiDBLite consensus disorder prediction 123 142 - -
Ahy15g3604 376 Pfam WRKY DNA -binding domain 197 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy15g3604 376 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 5 349 - -
Ahy15g3604 376 ProSiteProfiles WRKY domain profile. 190 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy15g3604 376 Gene3D WRKY domain 178 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy15g3604 376 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3604 Ahy-Chr15 158766019 158767949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3604 174 272 WRKY Transcription Factor Family AT5G52830 80.808 8.13e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy15g3604 WRKY 1.90E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3604 K13425 - aprc:113866622 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2783 13 107803181 107804587 Ahy15g3604 15 158766019 158767949 ECH
Ahy15g3604 15 158766019 158767949 Ahy15g3604 15 158766019 158767949 ECH
Ahy15g3604 15 158766019 158767949 Ahy5g3190 5 113772578 113774483 hybridization