Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3592 ATGGTATCCAAAAACCCGAACCCGCCGGAGGGCTTCTATTTGGACCCTACCGGTGCCGCTCTTCCCGGCCTCGCCCCCTTCGCCTCCGTCACTGCCGCCGCCACCGCCACCGCTGTATCCGCCCCTAACTCCGCGGAGGACGCCGCAAAGAAAATCCGAAAGCCATACACTATCACTAAGTCCAGGGAGAATTGGACTGAACCCGAACACGACAAGTTCCTCGAAGCTCTTCAACTGTTTGATCGTGACTGGAAAAAGATTGGAGCATTTGTTGGATCAAAGACAGTTATACAGATTCGTAGTCATGCACAGAAATACTTCATAAAAGTTCAGAAGAGTGGGACAAGTGAGCATCTTCCTCCACCCAGGCCGAAAAGAAAAGCTGCGCATCCTTATCCTCAAAAGGCTTCCAAAAATGCTCCTTTACTCTCACAGCTATCAGAATCTTTTCAATCTTCATCTGCTTTACTTGAGTCCGGATATGTCCTGAAACATGACCCCTCCACAATGCTTAAAACTCCTATTATGAACACTGTGGTGCCTTCATGGTCAAACTCCACCTTGCAAACCACTAATTTACTGCATGTACCAAAAGTGAACGACCCTTCTGGTAGCAGTGAGAGTACCCCCAGAGTGCAGCCAGGTGATGAATCCAATGGACAGGGGAATAGTAGCTTTCCACTAAGAGTGCTTCCCGATTTCACTCAAGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATACAACTGATCATTTGCACAAACTGAAAAACATGGACCGTATAGATGTTGAGACGGTCCTGTTGTTGATGAGAAATCTCTCTGTCAATTTAACTAGCCCAGATTTTGAGGACCATAGGAAGGTTCTTTCAACATACGAGGTTGAACTTGATACAGATGACTACATCAATGCAGATATACTTCAGGATGATCAGTTGAAGAGTGCTGCTACCTAG 957 0.4639 MVSKNPNPPEGFYLDPTGAALPGLAPFASVTAAATATAVSAPNSAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIGAFVGSKTVIQIRSHAQKYFIKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPLLSQLSESFQSSSALLESGYVLKHDPSTMLKTPIMNTVVPSWSNSTLQTTNLLHVPKVNDPSGSSESTPRVQPGDESNGQGNSSFPLRVLPDFTQVYSFIGSVFDPNTTDHLHKLKNMDRIDVETVLLLMRNLSVNLTSPDFEDHRKVLSTYEVELDTDDYINADILQDDQLKSAAT* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3592 318 MobiDBLite consensus disorder prediction 196 226 - -
Ahy15g3592 318 ProSiteProfiles SANT domain profile. 60 111 IPR017884 -
Ahy15g3592 318 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Ahy15g3592 318 Gene3D - 64 112 - -
Ahy15g3592 318 CDD SANT 64 107 IPR001005 -
Ahy15g3592 318 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Ahy15g3592 318 PANTHER PROTEIN REVEILLE 6 3 306 - -
Ahy15g3592 318 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Ahy15g3592 318 PANTHER SWI/SNF COMPLEX-RELATED 3 306 - -
Ahy15g3592 318 SMART sant 61 109 IPR001005 -
Ahy15g3592 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Ahy15g3592 318 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 60 109 IPR006447 GO:0003677
Ahy15g3592 318 MobiDBLite consensus disorder prediction 112 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3592 Ahy-Chr15 158664614 158668357 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy15g3592 Myb_DNA-binding 1.70E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3592 - - gmx:100783949 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3592 15 158664614 158668357 Ahy19g3583 19 158455565 158459719 ECH
Ahy15g3592 15 158664614 158668357 Ahy15g3592 15 158664614 158668357 ECH
Ahy15g3592 15 158664614 158668357 Ahy5g3177 5 113669075 113672876 hybridization