Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3585 ATGGCGGCAGGACTCTCCGCCGCAATTGCCTGGAAGCCCCTCCTCCGACCTCACCACCACCACCACCACAAACACCAATCCTTCAATCCTCACACTCCAACGCCTGCTTCCTTCTTCAGAACACACCAGAAGCCCGCAACTATAAAGTTCACTACCTGTGTTCTCATGGAAGACCCCAAGAAAACCGCCAGCAGCCACGTGGCGGAAAGCGAAAAGGACGAAGAAGAAACCGTTGTGGTTTATCCTCAGCTGGTTCCGCCACGTGTCGCGGAGAGATTGGCCAGGAAGAAGTCTGAGAGATTAACGTACCTCATTACCGCCATGATGTCTAGCTTTGGCATCACTTCCATGGCGGTCTTCGCTGTTTATTATAGATTCGCATGGCAATTTGAGGGTGGAGAAATTCCATTGTCTGAAATGTTTGGCACATTTGCTCTCTCCGTTGGTGCTGCTGTGGGTATGGAATTTTGGGCTAGATGGGCACACAGAGCTCTCTGGCATGCTTCTTTGTGGCACATGCATGAGTCCCACCATAGACCAAGAGATGGACCCTTCGAATTGAACGATGTGTTTGCAATAATAAACGCTGTTCCTGCCATTGCTCTTCTCTCCTTCGGTTTCTTCCACAAAGGACTAATCCCTGGCCTCTGCTTTGGTGCTGGTCTTGGAATCACAGTGTTTGGAATGGCTTACATGTTTGTGCACGATGGCTTAGTTCATAGGAGATTCCCTGTAGGTCCCATTGCCAATGTTCCCTACTTCAGAAGAGTTGCTGCTGCTCACAAACTTCACCATTCGGACAAATTCAATGGGGTGCCATATGGCCTCTTTTTGGGACCAAAGGAAATTGAAGAAGTGGGAGGGTTAGAAGAGCTTGAGAAAGAGATTAGTAGGAGAACAAAATCTTATAATAATAATAATAATAATAATAATAATAATAATAATAGTTCATGA 954 0.4686 MAAGLSAAIAWKPLLRPHHHHHHKHQSFNPHTPTPASFFRTHQKPATIKFTTCVLMEDPKKTASSHVAESEKDEEETVVVYPQLVPPRVAERLARKKSERLTYLITAMMSSFGITSMAVFAVYYRFAWQFEGGEIPLSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPRDGPFELNDVFAIINAVPAIALLSFGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRRVAAAHKLHHSDKFNGVPYGLFLGPKEIEEVGGLEELEKEISRRTKSYNNNNNNNNNNNNSS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3585 317 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 13 302 IPR045019 GO:0016491
Ahy15g3585 317 MobiDBLite consensus disorder prediction 298 317 - -
Ahy15g3585 317 PANTHER BETA-CAROTENE HYDROXYLASE 13 302 - -
Ahy15g3585 317 Pfam Fatty acid hydroxylase 150 277 IPR006694 GO:0005506|GO:0008610|GO:0016491
Ahy15g3585 317 Coils Coil 289 309 - -
Ahy15g3585 317 MobiDBLite consensus disorder prediction 301 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3585 Ahy-Chr15 158618052 158620718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3585 1 220 Chloroplast and Mitochondria Gene Families AT4G25700 60.000 1.41e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3585 K15746 - gmx:100785541 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3585 15 158618052 158620718 Ahy15g3585 15 158618052 158620718 ECH
Ahy15g3585 15 158618052 158620718 Ahy5g3171 5 113610348 113613065 hybridization