Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3563 ATGGCAGCAGAGTCTCTGAATCTGAAGATCACAGGTAAGAGCCATGTGAAGGCAAAGAAGAACATTGGAAGAAAAGAGTATCAACTTGTGACCTTTGATCTTCCATACTTAGCATTTTACTACAACCAGAAGCTGCTGTTTTATAAAGGGAATGACTTTAAAGGAATGGTGGAGAAGGTGAAAGAGGGTCTAAGTGTGGTTCTTGAGGAGTTTCATCAGCTAGCAGGGAAGATAGGAAAAGATGAAGAAGGAGTTTTCAGAGTGGAATATGATGATGAAATGGAAGGTGTTGAAGTAACTGAGGCTGTTGCTGAGGATGTTGGTGTTGAAGATCTTGCTGTTTCTGAGAGTAGCAGTTCCTTGATGGAACTTGTTCCTTACAATGGTATCTTGAATTTAGAAGGCATGCATAGGCCTTTGCTTGCAATTCAGCTGACCAAACTGAAAGATGGGCTTGCAATGGGCTGTGCCTTCAACCATGCAGTCCTTGATGGGACTTCCACGTGGCAATTCATGAGTTCATGGGCCGAGATCTGCAGCGGCGCACCATCAACAGTAGCCCCACCCTTCCTTGACCGGACCAAGGCCCGAAACACCCGCGTGAAGCTTGACCTCTCATTGCCGGAGCCCAATGGGCTTCCATCCGAGAATGAGGAAAAGCCCAAGCCCAAATTAAGAGAAAAGATCTTCAAATTTTCCGAGTCTGCCATCGACAAGATCAAGTCAACGGTCAACGAAAACCCACCATCGGACGGCTCAAAGGCATTCTCAACATTCCAAGCTCTCTCGGCCCATGTTTGGCGCCACATAACCCTGGCCCGTAACCTAAAGCCCGAAGACTACACAGTCTTTACCGTATTCGTAGATTGTAGAAAACGGATCGACCCACCAATGCCAGAGGCCTATTTTGGAAACCTTATCCAAGCCATATTCACGGTGACAGCAGGTGGGCTTCTGTTGGCCCATCCACCACAATTCGGTGCATCATTGATCCAAAAAGCAATTGAAGCCCACAATGCTAAAGCAATTGATGAAAGAAACAAAGAGTGGGAGAGTGCACCAAAGATTTTTGAATTCAAGGATGCTGGAGTGAATTGTGTGGCTGTGGGAAGCTCTCCTAGGTTTAAAGTTTATGACATTGATTTTGGATGGGGGAAGCCTGAAAATGTGAGAAGTGGAACCAATAACAAATTTGATGGTATGATTTATTTGTATCCCGGCAAGAGTGGTGGTAGGAGCATTGATGTTGAGTTGACTTTGGACCCTCATGCTATGGAGATTTTGGAGAAAGACAAAGACTTCCTTCTTGAGGTTTAA 1317 0.4541 MAAESLNLKITGKSHVKAKKNIGRKEYQLVTFDLPYLAFYYNQKLLFYKGNDFKGMVEKVKEGLSVVLEEFHQLAGKIGKDEEGVFRVEYDDEMEGVEVTEAVAEDVGVEDLAVSESSSSLMELVPYNGILNLEGMHRPLLAIQLTKLKDGLAMGCAFNHAVLDGTSTWQFMSSWAEICSGAPSTVAPPFLDRTKARNTRVKLDLSLPEPNGLPSENEEKPKPKLREKIFKFSESAIDKIKSTVNENPPSDGSKAFSTFQALSAHVWRHITLARNLKPEDYTVFTVFVDCRKRIDPPMPEAYFGNLIQAIFTVTAGGLLLAHPPQFGASLIQKAIEAHNAKAIDERNKEWESAPKIFEFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLDPHAMEILEKDKDFLLEV* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3563 438 Gene3D - 5 205 IPR023213 -
Ahy15g3563 438 Gene3D - 210 431 IPR023213 -
Ahy15g3563 438 Pfam Transferase family 8 434 - -
Ahy15g3563 438 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 14 434 - -
Ahy15g3563 438 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 14 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3563 Ahy-Chr15 158404526 158408376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3563 40 438 Monolignol Biosynthesis Gene Families AT5G48930 26.950 2.09e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3563 K19747 - gmx:100790669 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3563 15 158404526 158408376 Ahy15g3563 15 158404526 158408376 ECH
Ahy15g3563 15 158404526 158408376 Ahy5g3152 5 113337632 113340772 hybridization