Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3554 ATGGCAGTTTCTGCAAAAGAAAAAGCAAAAGCAAAAGCGAAGGGCTATGATGGGAGTATGGAAGTGGTGAAAACGGAAGATAGAATAGATACAATAATCAGACAAGCGATTGGCAGGGAACCTTTTTTCACTTTTCCAAGGGCCACTGACACCCCTGTTCAGTGGATTCAGTTACTTCATGCCTTGGATCAGCAGGGTGTTAGCAATTCTTTTCCAGAACTTCCAGGGTGGCCATTGCTCTATCCTGTAAAGGTTCAGTTGCAGAAGTGTGACAAATGTTCTCGAGAGTTTTGCTCCACCATTAATTATAGAAGACATATACGTGCACACCATCGATTGAAAAAGCTTGATAAGGATTCTACAAAAAATAGGGACCTTTTAGGAGCATATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGTTGTATCGTTTGAGAATGTGATGCTGGAGGAAGTTCCAGCATCTTCAATTTTAGAAGCTCTGACAGCCCTTCTACAAAAGCCAGGATTTTCTTCATTACCACAGTATTATCTGAGGGCTGGTGCTGCCCTTTTGGATATTGTTCACTCTCAGTCTTCCTGCTTTCCCTTATCTTCCCAGGAGTTGTTCACTATCCTTGATGATGCTAGTGAAAAAACATGTTTATGTGGGACTGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAAATTGGTCTTGAACCAAGAAATTTAGTTGCTTGCACATGTTTCTTGCTAGAACAGAAGTTGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCCTTGAGGTGCCACAGGCAGCTGGTGGAGGAGGAAGAAGCTGCTCAAAAAAGACAAGCTGAGATATTGGAGAGGAGACGCCAGAAGAAGCTTAGACAAAAAGACCAGAAGGCAAGGGAACAAAGGCATGAGGCAGAAATTGAAGAGCACATTGGGAGCGCAGAAGATGATTTATCAGCAGCAGAAGCATCTTTGGCTACTTATGATTCTGAAGCACATAATCTGGAAACATTCATAGATAGCGCTCCTTCATATGATCCTTTTCAATGCCCTGACACAAATGTAGGACTAGATGGCGTTCAATCTAGTTACAATCTTGGCAGTGATCAGTATATTGAAAGACGGTCGGCACGTCGACCCAATCGTAGACTCACAGCAGTTTCCAGACAGAAGGGTCCGCAAAAATCACAATGGGCTGTAGCGAATGATTCTCATACAAGCCAGAACTCAACACTTTCAAAGATTGAAGTCATTCAGAAATATGGAACCCATCGTGATCATAGGGTAGCTACAGTAGCTAATGGTTGTAGAGTTTGGAGTCCAAAGTCAAAACCAGAAATTGATAGGATGGTTCCAGAAGCTAGAGTAGATAAAGAACCAGACCAAGATAAGGATCATGAAGTTTTGATAGGATCTATATCAATTACTCTAGGGAATTGCAGCCAATCAGAGCGTAATGCAGTGGCATCTCGAGCAGACTGCAATGTTGACAATCTGGCCAACCAGAATAGTTCTCAGAATAAGCCATTGAATCCTGATTTTTTCCAGAATAGCAACAATATGGCCACTAAGCTTTGGAGGCCAGTTAGCCGGCACGAAACTAAAAATCCACTTCCAGTTCAAAGTGGTGAGACAGAAGTGAGTACAATTCATGAAAATGGAGATTGTCAGAACCAGTCAGATCCAAGTTGTTTAAGGTCGTGCAGTACAGACGGTAGTGATGTCGGTTTCGAGATTAATGTTTCCAATACAGAGGGGATAATGGATCCAGGAAGCTTACAGTTATTATCCAGCCATGCCGCAAAAGTTTTTCTTGAACAAAGATGGAAAGAAGCTATGTCATCAAATCATCTGCAATTGATTGTTTCCGACTATGAACCTCCTGGATGCCAGGAAATACAGGATTCTAGAATGGCAGTATGTCAATCTTCTGAGGTTAGAGTTAAGCGGTTAGCCGCAGCCCCGAAGGTTCCTCAATCCAATCACAGAATGAAGCCTGAAAAGGGAACCAAGATAAAATATATTCCCAAACAAAAGACAGCTGCCTAA 2064 0.4239 MAVSAKEKAKAKAKGYDGSMEVVKTEDRIDTIIRQAIGREPFFTFPRATDTPVQWIQLLHALDQQGVSNSFPELPGWPLLYPVKVQLQKCDKCSREFCSTINYRRHIRAHHRLKKLDKDSTKNRDLLGAYWDKLSIEEAKEVVSFENVMLEEVPASSILEALTALLQKPGFSSLPQYYLRAGAALLDIVHSQSSCFPLSSQELFTILDDASEKTCLCGTAVSMQRYIFDGEAGKIGLEPRNLVACTCFLLEQKLVKAWLADKDAEALRCHRQLVEEEEAAQKRQAEILERRRQKKLRQKDQKAREQRHEAEIEEHIGSAEDDLSAAEASLATYDSEAHNLETFIDSAPSYDPFQCPDTNVGLDGVQSSYNLGSDQYIERRSARRPNRRLTAVSRQKGPQKSQWAVANDSHTSQNSTLSKIEVIQKYGTHRDHRVATVANGCRVWSPKSKPEIDRMVPEARVDKEPDQDKDHEVLIGSISITLGNCSQSERNAVASRADCNVDNLANQNSSQNKPLNPDFFQNSNNMATKLWRPVSRHETKNPLPVQSGETEVSTIHENGDCQNQSDPSCLRSCSTDGSDVGFEINVSNTEGIMDPGSLQLLSSHAAKVFLEQRWKEAMSSNHLQLIVSDYEPPGCQEIQDSRMAVCQSSEVRVKRLAAAPKVPQSNHRMKPEKGTKIKYIPKQKTAA* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3554 687 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 12 686 - -
Ahy15g3554 687 MobiDBLite consensus disorder prediction 540 567 - -
Ahy15g3554 687 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Ahy15g3554 687 Coils Coil 271 313 - -
Ahy15g3554 687 MobiDBLite consensus disorder prediction 660 687 - -
Ahy15g3554 687 MobiDBLite consensus disorder prediction 291 310 - -
Ahy15g3554 687 MobiDBLite consensus disorder prediction 538 567 - -
Ahy15g3554 687 ProSitePatterns Zinc finger C2H2 type domain signature. 90 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3554 Ahy-Chr15 158325092 158330577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3554 20 684 C2H2 Transcription Factor Family AT4G25610 40.762 3.36e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy15g3554 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3554 - - gmx:100809067 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3554 15 158325092 158330577 Ahy15g3554 15 158325092 158330577 ECH
Ahy15g3554 15 158325092 158330577 Ahy5g3145 5 113275772 113281369 hybridization
Ahy15g3554 15 158325092 158330577 Ahy19g3571 19 158376254 158381857 PCT
Ahy15g3554 15 158325092 158330577 Ahy9g2055 9 109100709 109106324 PCT
Ahy19g3571 19 158376254 158381857 Ahy15g3554 15 158325092 158330577 PCT
Ahy9g2055 9 109100709 109106324 Ahy15g3554 15 158325092 158330577 PCT