Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3544 ATGGAACAATCTGCCTCCTCCACTCTCACCGGACTTCTCCGCCGGGCAGCCGATACCTTCCCCTCGCGTCGCGCCATCTCTGTCGCCGGCAAGTTTGATCTCACCCACTCCCGCCTCCAACATCTCGTCGATATCGCAGCCAACCGCCTCATCTCTGCTGGCATCAAGCCCGGCGATGTCGTGGCTCTCACCTTCCCCAACACCGTCGAGTTTGTGATAACCTTCTTAGCTGTTATTCGAGCGCGTGCGACTGCAGCGCCACTTAACCCCGCGTACACTGCGGAAGAGTTCGAGTTTTATTTATCAGACTCAGAATCCAAACTTCTAGTAACTTCTTCTGAAGGAATCAAGCCGGCTCAAGCCGCGGCTTCCAAGCTCACCATCCCTTGCGCCGCGGCTTCATTAAATACACCCGAACAAGCCGATAATGAAGCAGCCGAAGCCGAATTCACCCTCTCCCTCAGCCACCGTCCTGACTCGGACTCTAACTCGGACCACGACTCGCTCTCCGGACTCACCAACGATCCTTCCGACGTGGCGCTCTTCCTCCACACCTCCGGCACCACGAGCCGCCCCAAGGGCGTGCCGCTGACTCAGCACAACCTCTTTTCCTCCGTTCGCAACATCCAATCGGTGTACCGACTCACTGAGTCAGACTCGACGGTGATCGTGCTCCCTCTCTTCCACGTCCACGGCTTAATCTGCGGATTACTCAGCTCTATCGGCGCCGGAGCAGCCGTAGCCTTGCCGGCGGCGGGGAGATTCTCCGCGTCGACGTTCTGGAAAGACATGATCAAGTACAACGCCACGTGGTACACCGCGGTTCCAACGATACACCAGATCGTACTTGATCGCCACCAGAACAACCCCGAACCGGTTTACCCGAAGCTCCGGTTTATTCGTAGCTGCAGCGCGTCGCTGGCACCGGCTATTCTGGGTCGGTTGGAGGAGGCTTTCGGTGCACCGGTTTTGGAGGCTTATGCGATGACGGAAGCCTCTCATTTAATGGCTTCGAATCCGTTGCCGGAAGATGGGCCCCACAAGGCCGGGTCCGTTGGAAAGCCCGTGGGGCAAGAGATGCGCATATTGGATGAAACGGGCCGGGTCTTGGAGGCTGAGGTTAACGGTGAGGTTTGTATTAAGGGTCCCAATGTGACGAATGGTTATAAGAATAACCCAGATGCTAATACGGCGGCGTTTCAGTTTGATTGGTTCCATACCGGTGATCTTGGTTACTTTGATTCTGACGGCTATTTGCATATTGTGGGTCGGATCAAGGAGCTCATTAACCGTGGAGGAGAGAAAATATCACCAATAGAAGTGGATGCTGTCCTCCTATCTCATCCTGATATTGCTCAGGCGGTTGCTTTCGGAGTTCCCGATGACAAATACGGCGAGGAGATAAACTGTGCAATCATCCCAAGAGAAGGGTCAAACATTGATGAGGAAGAGGTGCTGAGATTTAGCAAGAAGAATCTTGCATCTTTCAAAGTCCCCAAGAAGGTCTTCATCACTGATTCATTGCCCAAGACAGCCACTGGCAAGATTCTACGCCGCCTAGTAGCTGAACATTTTGTCTCTCAAAAATGA 1590 0.5409 MEQSASSTLTGLLRRAADTFPSRRAISVAGKFDLTHSRLQHLVDIAANRLISAGIKPGDVVALTFPNTVEFVITFLAVIRARATAAPLNPAYTAEEFEFYLSDSESKLLVTSSEGIKPAQAAASKLTIPCAAASLNTPEQADNEAAEAEFTLSLSHRPDSDSNSDHDSLSGLTNDPSDVALFLHTSGTTSRPKGVPLTQHNLFSSVRNIQSVYRLTESDSTVIVLPLFHVHGLICGLLSSIGAGAAVALPAAGRFSASTFWKDMIKYNATWYTAVPTIHQIVLDRHQNNPEPVYPKLRFIRSCSASLAPAILGRLEEAFGAPVLEAYAMTEASHLMASNPLPEDGPHKAGSVGKPVGQEMRILDETGRVLEAEVNGEVCIKGPNVTNGYKNNPDANTAAFQFDWFHTGDLGYFDSDGYLHIVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFSKKNLASFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQK* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3544 529 CDD FACL_fum10p_like 21 523 IPR045310 GO:0016874
Ahy15g3544 529 Pfam AMP-binding enzyme C-terminal domain 440 515 IPR025110 -
Ahy15g3544 529 Gene3D - 7 424 IPR042099 -
Ahy15g3544 529 PANTHER ACYL-COA SYNTHETASE 6 528 - -
Ahy15g3544 529 Gene3D - 425 527 IPR045851 -
Ahy15g3544 529 PANTHER OXALATE--COA LIGASE-LIKE 6 528 - -
Ahy15g3544 529 SUPERFAMILY Acetyl-CoA synthetase-like 7 526 - -
Ahy15g3544 529 Pfam AMP-binding enzyme 14 431 IPR000873 -
Ahy15g3544 529 ProSitePatterns Putative AMP-binding domain signature. 182 193 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3544 Ahy-Chr15 158188912 158192654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3544 1 528 Monolignol Biosynthesis Gene Families AT4G05160 29.346 1.81e-62 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3544 K22133 - gmx:100779306 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3544 15 158188912 158192654 Ahy15g3544 15 158188912 158192654 ECH
Ahy15g3544 15 158188912 158192654 Ahy5g3131 5 113025575 113029564 hybridization