Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3507 ATGGCTCAACCTCACCCCAATCATCTCACTTGGATTCACCTTCACCTCATCCTCCTCTTCCTCCTCCATGGTAGTCATAGTGTAGTTCATGCACAAGGTTCCATGGAGCCAGTTCCCACAGACATCTCCCACCACAGTTGGCAACCTTCTTTTGCAATCACCATAGGTGCCATCATCTGTGCCTTCCTCTTCATGGGGATCATCACAGTCTACCTTCGTAACTGTACTGGTTCACACATCAACAACAGAAACCAAACCAACCAAACCTCCTCAGAATGTTCATGTTCTTGTTCACAAGGGATCACTAAGGAACTCCTCAACACTTTCCCAATCCTCTTCTACCCCACCATCAAGGACCTCAAGATAGGTAAAGCATCATTGGAATGTGCAATTTGCTTAACTGATTTCAAGGACTATGACACACTGAGGCTTCTACCAAAGTGCAACCATGTCTTTCACCCTCAATGCATAGACTCATGGCTATGTTCCCATGTCACGTGCCCGGTTTGTCGCGCGAATCTGAACCAAGACACATGTGAAATTGCCATAACTGTTCCGACCCAATTGAGCACTCCCCAAAGGGGTGAAGAAAGTCTAGGACTTGAAGCCGAAAACAACGGTGGTGAAGAGAACAACGCGGTGGAACAAAACCATGTCGAGAAAAACGAGGTTTTGAACAGCAACGATGGTGGTGGTGGTGAAGGTGATGGTGGTAGTGACGGGGTTGTGTCAAAACCGAAGCTTTTGAAGTCAAATTCAACAGGACACACGGTTGTGGAGCAAGTGAAGAGCGAGGAGAGGTACACACTGAGGTTACCGGAAGATGTGAGGAGGTACATTCTGGTGAACCATGGTGAAACGGTGCAGCGTTCCTCCAGCTACAACAACAACAATGGCAACAACGTGGTGAGAGGGGTGTGTTGGAGTGAGATTGAAGAGAGCAGCGGTGGTGGTAAGAGAAGCAACAATGGTGAGGTGAAGGTGGAGAGGTGGGTGCTTTGTAGCCGTGGTTGA 1014 0.4832 MAQPHPNHLTWIHLHLILLFLLHGSHSVVHAQGSMEPVPTDISHHSWQPSFAITIGAIICAFLFMGIITVYLRNCTGSHINNRNQTNQTSSECSCSCSQGITKELLNTFPILFYPTIKDLKIGKASLECAICLTDFKDYDTLRLLPKCNHVFHPQCIDSWLCSHVTCPVCRANLNQDTCEIAITVPTQLSTPQRGEESLGLEAENNGGEENNAVEQNHVEKNEVLNSNDGGGGEGDGGSDGVVSKPKLLKSNSTGHTVVEQVKSEERYTLRLPEDVRRYILVNHGETVQRSSSYNNNNGNNVVRGVCWSEIEESSGGGKRSNNGEVKVERWVLCSRG* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3507 337 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 235 303 - -
Ahy15g3507 337 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 216 - -
Ahy15g3507 337 MobiDBLite consensus disorder prediction 209 224 - -
Ahy15g3507 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 180 IPR013083 -
Ahy15g3507 337 Pfam Ring finger domain 128 171 IPR001841 -
Ahy15g3507 337 MobiDBLite consensus disorder prediction 190 258 - -
Ahy15g3507 337 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Ahy15g3507 337 CDD RING-H2_EL5_like 128 171 - -
Ahy15g3507 337 PANTHER RING FINGER DOMAIN-CONTAINING 235 303 - -
Ahy15g3507 337 PANTHER RING FINGER DOMAIN-CONTAINING 8 216 - -
Ahy15g3507 337 SMART ring_2 129 170 IPR001841 -
Ahy15g3507 337 SUPERFAMILY RING/U-box 128 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3507 Ahy-Chr15 157824551 157826463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3507 7 281 Rapid Response to Elicitors AT3G05200 33.569 4.28e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3507 K10664 - gmx:100782532 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3507 15 157824551 157826463 Ahy5g3095 5 112647438 112649277 hybridization