Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3502 ATGACTCCGCCTCCACCCACGCCGGTGGACACCTCCGATTCCCCCGCTACCGGCGGTGAGTCTCAGAGATCCATTCCGACTCCCTTTCTAACTAAGACCTACCAGCTCGTTGAGGACCAGTCCATTGATGACGTCATCTCCTGGAACGACGACGGATCCACCTTCATCGTCTGGAATCCTACCGTCTTCGCCAGAGACCTTCTCCCTAAGTATTTCAAGCACAACAATTTCTCCAGCTTTGTTCGCCAGCTCAACACCTATGGCTTTAGAAAAGTTGTACCTGATCGGTGGGAATTCTCCAACGACTGTTTCCGCCGGGGAGAGAAGCGCCTCCTCTGCGAGATTCAGCGCCGGAAGATCTCCACGCCGTCACCGTCGCCGTCTCCCACGGCTGCCGGGATTGCCACCGCCACCGTCGCGGTTCCTTCTCCGATGCCGTTGACCGCCATACCCACGGCGATGCCGATAATATCACCGTCTAACTCCGGCGACGAGCAGGTGATATCGTCGAGCTCTTCGCCGTCGCGAGCCCCGGCGGAGCTCCTCGACGAAAACGAGAGGCTACGGAAGGAGAACGTGCAGCTGACGAAGGAGCTCGCCGAGATGAGATCGCTTTGCAACAACATCTTCTCCCTGATGTCGAATTACGCCACCACCAACGCCGCCACAACTACCACCACAAACAACAGCAACAGCAACCAAATCAATGGAAGCGCCCAAGGAAGCAGAGATTCCGCTTTCACGGCAGTGAGGCCGCTAGATTTGATGCCGGTGAAGAGGAGTTCGAGCGGGGAACCGTGGACGGAAACGGCGACGGCGATGATGGTGGAGGAGATGAATCCGAAGCTCTTTGGCGTGGCAATTGGAGCAAAGCGTGCGAGAGAAGGTGGTGGTGGTGGTGGTGGTGGTGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGTGGTAGTGCTGGTGGAAGAGAAGGGGAGGAGGATACGCTGTTGCGCCTTCATCAGCCTGGTTATGCGGACGTGAAATCGGAGCCGTTAGATTGCCAGAACCATCGCGATAATAGTAGTAATCAGGAGACCCCATGGCTGAATCAGTGCCACAGAGCGAATCAAAGAGTTTGCAATTGA 1128 0.5683 MTPPPPTPVDTSDSPATGGESQRSIPTPFLTKTYQLVEDQSIDDVISWNDDGSTFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFRRGEKRLLCEIQRRKISTPSPSPSPTAAGIATATVAVPSPMPLTAIPTAMPIISPSNSGDEQVISSSSSPSRAPAELLDENERLRKENVQLTKELAEMRSLCNNIFSLMSNYATTNAATTTTTNNSNSNQINGSAQGSRDSAFTAVRPLDLMPVKRSSSGEPWTETATAMMVEEMNPKLFGVAIGAKRAREGGGGGGGGEGGGGGGGGGGGGGGSAGGREGEEDTLLRLHQPGYADVKSEPLDCQNHRDNSSNQETPWLNQCHRANQRVCN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3502 375 MobiDBLite consensus disorder prediction 224 244 - -
Ahy15g3502 375 MobiDBLite consensus disorder prediction 155 178 - -
Ahy15g3502 375 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy15g3502 375 PRINTS Heat shock factor (HSF) domain signature 29 52 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy15g3502 375 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy15g3502 375 MobiDBLite consensus disorder prediction 295 363 - -
Ahy15g3502 375 ProSitePatterns HSF-type DNA-binding domain signature. 68 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy15g3502 375 MobiDBLite consensus disorder prediction 12 26 - -
Ahy15g3502 375 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 361 IPR027725 -
Ahy15g3502 375 MobiDBLite consensus disorder prediction 155 181 - -
Ahy15g3502 375 SUPERFAMILY "Winged helix" DNA-binding domain 26 118 IPR036390 -
Ahy15g3502 375 SMART hsfneu3 25 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy15g3502 375 Pfam HSF-type DNA-binding 29 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy15g3502 375 MobiDBLite consensus disorder prediction 1 26 - -
Ahy15g3502 375 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A 12 361 - -
Ahy15g3502 375 Coils Coil 185 205 - -
Ahy15g3502 375 Gene3D - 21 119 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3502 Ahy-Chr15 157777741 157779684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3502 1 375 HSF AT5G62020 43.590 1.77e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy15g3502 HSF_DNA-bind 1.20E-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3502 K09419 - gmx:100812267 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3502 15 157777741 157779684 Ahy15g3502 15 157777741 157779684 ECH
Ahy15g3502 15 157777741 157779684 Ahy5g3092 5 112591996 112593932 hybridization