Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3477 ATGCGAAACCCATTATCTTCGATGACTATCAAGGAAAAGCATCCTGCTAGCAAGAAGGAGCCAAAAAATAATATTGCCAAGGAGGTTCATTACAGGGGTATAAGGAAGAGGCCATGGGGCCGTTACACCGCCGAGATTCGTGATCCCAGAAAGAAGAGCCGCGTCTGGCTCGGAACATTCGACAGCGCTGAGGAAGCCGCCATGGCATACGACGACGCCGCCAAGAAGTTCTACGGTGCCAAGGCGAAGACCAATTTCCCTTGCGTTTCCCACCGTGAAAACGAAGACATCTTCGCCGTCGCCGGCAGAAAATGCGGCATCGTTGAGTCTTATCCGATTGATTCTGCGCCTGAGCGTGACGTGACACGGCAGACAGAAGTAGATCAGTTTTTTCCGTTTGTTCCATACTGTGGTGGTGAGGGCGTGGTTGCACCGGTGCGTCCGGTTTTTTTGCCTGAACCAGTTGGTAGGGTTGAGTTCATTGGCGAGCGGAGTTGTTGTCCTTTCCGGTTTGAGCCAGTAAGGATGGGTGGGTTTAATGCACGGTCTGAGAGTGGGGCACAGAGTAACTCGGATTCAACATCAGCTGTCGATTGCAAACCAAATGGAGTTCTTAATCTTGATCTGAACCTCGCTCTACCCATTGGCCATTGA 654 0.5138 MRNPLSSMTIKEKHPASKKEPKNNIAKEVHYRGIRKRPWGRYTAEIRDPRKKSRVWLGTFDSAEEAAMAYDDAAKKFYGAKAKTNFPCVSHRENEDIFAVAGRKCGIVESYPIDSAPERDVTRQTEVDQFFPFVPYCGGEGVVAPVRPVFLPEPVGRVEFIGERSCCPFRFEPVRMGGFNARSESGAQSNSDSTSAVDCKPNGVLNLDLNLALPIGH* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3477 217 MobiDBLite consensus disorder prediction 1 24 - -
Ahy15g3477 217 CDD AP2 30 87 IPR001471 GO:0003700|GO:0006355
Ahy15g3477 217 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Ahy15g3477 217 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Ahy15g3477 217 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Ahy15g3477 217 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Ahy15g3477 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 28 106 - -
Ahy15g3477 217 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 28 106 - -
Ahy15g3477 217 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Ahy15g3477 217 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Ahy15g3477 217 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3477 Ahy-Chr15 157565416 157566325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3477 18 215 AP2-EREBP Transcription Factor Family AT5G44210 42.211 1.02e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy15g3477 AP2 9.40E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3477 K09286 - qsu:112001675 154.836