Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3469 ATGGCACCTTCTCGGGTGGCTGGAGGGTTAACCCAATCATCATCAGGTTCTGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAGTGTAGTCAACTCTCACATAAGCTCATCATTCGGTAACTCATCTAATGCGGTCCCTGGAGCTGGTCGTTCTCACCTGGGTCCAGTGTCTGGGGATATGAATAATGCAGTTTTGAACAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCTAGCTCTTTAGTCACAGATGCAAATTCAGCATTCTCTGGTGGGCCCCATTTGCAGAGAAGTGCAAGCATTAACACAGACTCATACTTACGTTTACCTGCTTCGCCCATGTCATTTACATCAAATAATGTTAGTATTTCAGGGTCATCAGTTATGGATGGTTCCAGTGTAGTACAGCAGAGCTCTCACCAAGATCAGAATGTCCAACCATTGCAGCAGAATCAGCAGCATGGTGCCTCTAGTGCTATGTCTATGCCTGGATCTCAAAGTGCCCCTTCCCCGCTTCCAATGGGTGCACAAATACCAGGATCTTTCATGCAAAATACGGATAATTTATCCCAGCTGTCCAAAAAACCTAGGCTGGATATTAAGCAGGAGGATTTAATGCAACAGCAGGTTATACAACAGCTTCTTCAAAGACAGGACACCATGCAATATCAGGGGCGTAATCCACAGATACAGGCTTTGATTCAGCAGCAGCAAAGACTGAGGCAACAACATATCCTTCAGTCAATGCCACAGTTACAGCGAGCACACTTGCAGCAGCAGCAGCAACAACAGCAGCAGCAACAACAACAAATGCATTTGAGGCAGCAGCAATTACAGCAACAATCAATGCAATCTGCAGTAAAGCGCCCGTATGACAGCAGTGTTAATGGAGTATGTGCTCGCAGATTGATGCAATACCTCTATCATCAAAGGCAACGCCCAAGTGAAAACACTATTGCCTATTGGAGAAAATTTGTGGCCGAGTATTACTCTCCTCGAGCAAAGGAACGGTGGTGCTTGTCATTGTATAATAATGTTGGGCATCATGCACTCGGTGTTTTCCCTCAGGCATCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTGCTCCCTAGACTCAATGACATCAAATTTGGTAGTGGAGTAATTGATGAACTTCTCTTTTTGGAGTTGCCACGCGAACAAAGATTTCCTTCTGGTGTAATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGCGTATACGAGCAACTTCGTGTTGTTCGTGAGGGTCACCTGCGTATTATATTTACACAAGACCTTAAGATATTATCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTAAACCAGTTGGTCCAAGTAGCTCAAAAATGTCAGAGTACAATTGCTGAAAGTGGTTCAGATGGGGTTTCTCAGCAAGATCTGCAAACAAACAGCAATATGGTTTTGGCTGCTGGCCGTCAACTTGCAAAGAGTCTGGAGTTGCAATCTCTAAATGATTTAGGTTTTTCCAAAAGATATGTAAGATGTTTGCAGATATCTGAGGTTGTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTGGAGCAATTGAGAGCTTGAAGAATTATCCTCGTTTTGCAACCGCGGCTAAGCTCCAGATGCAAAAAATGCATGAGATGGAACAGCTAGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACGATTAACAAACTAATGGCAATGAATCCTAGTTTGAACAACCCAATAAATAATAATCCTAATATGATAAATCGTGGTGGTTTGAGTGGATCAGCACAAGCTGCTCTGGCACTTAACTACCAGAGTCTTCTTATGAGGCAAAACTCGATGAATTCAAGCCCTGGCTCAATTCAGAGAGAAGGATCATCATCTTTCAACAATGCAAACCAGAGTCCCTCGTCAGCTATGCAAGGTGCTACCTCTGCCTTTATTCCAGGTTCAATGCAGAATTCACCCATTGGTGGTTTCCCGAGTCCCCATCTACCCCCGCAGCAGCAACAGCAGCAGCCGCAACAACACCTTCAACAGAGATCCTTAAGTGCAAATAGCTTCATGCAACAAAACCATTCACAGGGATCCCAAGGAAATCAAGCTCTACAGCAGCAGATGATCCAGCAACTGCTGATGTCAAATAACAATGGGGGAGTACAATCACAATCTCTTGGTGGACCCAATGCAAATGGGAGCATAGCAAAGAATGGGTTGGGTTTCGGAGGACACTCTCCGTCTCCTTCCATAACTGGAGGATCTGTCAATGTTTCAGGAAATAAAGGTCCGGTTTCAAGGAGCAATAGCTTCAAATCGGCCTCAAACAGTGATTCTTCTCCGGCTGGTGGCAACAATGGATTCAACCCGAGAACTTCGGATATACCGCAGAATCTGCATTTGCAAGATGTGGTTCCAGATATTGCCAGTGATTTTACAGATAGCCCTTCTTCAGTAGTGATCTGGATGATAACATGGGTTTTGGCTGGAAGGCATGACTAA 2592 0.4456 MAPSRVAGGLTQSSSGSGIFFQGDGQSQSVVNSHISSSFGNSSNAVPGAGRSHLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSAFSGGPHLQRSASINTDSYLRLPASPMSFTSNNVSISGSSVMDGSSVVQQSSHQDQNVQPLQQNQQHGASSAMSMPGSQSAPSPLPMGAQIPGSFMQNTDNLSQLSKKPRLDIKQEDLMQQQVIQQLLQRQDTMQYQGRNPQIQALIQQQQRLRQQHILQSMPQLQRAHLQQQQQQQQQQQQQMHLRQQQLQQQSMQSAVKRPYDSSVNGVCARRLMQYLYHQRQRPSENTIAYWRKFVAEYYSPRAKERWCLSLYNNVGHHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNDIKFGSGVIDELLFLELPREQRFPSGVMMLEYAKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLAAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICREHKIGAIESLKNYPRFATAAKLQMQKMHEMEQLANVQGLPTDRNTINKLMAMNPSLNNPINNNPNMINRGGLSGSAQAALALNYQSLLMRQNSMNSSPGSIQREGSSSFNNANQSPSSAMQGATSAFIPGSMQNSPIGGFPSPHLPPQQQQQQPQQHLQQRSLSANSFMQQNHSQGSQGNQALQQQMIQQLLMSNNNGGVQSQSLGGPNANGSIAKNGLGFGGHSPSPSITGGSVNVSGNKGPVSRSNSFKSASNSDSSPAGGNNGFNPRTSDIPQNLHLQDVVPDIASDFTDSPSSVVIWMITWVLAGRHD* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3469 863 PANTHER LIM DOMAIN-BINDING PROTEIN 177 706 IPR029005 -
Ahy15g3469 863 PANTHER LIM DOMAIN-BINDING PROTEIN 5 150 IPR029005 -
Ahy15g3469 863 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 177 706 - -
Ahy15g3469 863 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 150 - -
Ahy15g3469 863 MobiDBLite consensus disorder prediction 1 57 - -
Ahy15g3469 863 MobiDBLite consensus disorder prediction 778 827 - -
Ahy15g3469 863 MobiDBLite consensus disorder prediction 7 48 - -
Ahy15g3469 863 Pfam LIM-domain binding protein 302 562 IPR029005 -
Ahy15g3469 863 MobiDBLite consensus disorder prediction 127 172 - -
Ahy15g3469 863 Coils Coil 257 277 - -
Ahy15g3469 863 MobiDBLite consensus disorder prediction 747 762 - -
Ahy15g3469 863 MobiDBLite consensus disorder prediction 644 714 - -
Ahy15g3469 863 MobiDBLite consensus disorder prediction 127 187 - -
Ahy15g3469 863 MobiDBLite consensus disorder prediction 747 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3469 Ahy-Chr15 157413821 157419646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3469 297 566 C2H2 Transcription Factor Family AT1G43850 60.370 7.70e-108 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3469 - - gmx:100816886 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3469 15 157413821 157419646 Ahy15g3469 15 157413821 157419646 ECH
Ahy15g3469 15 157413821 157419646 Ahy5g3059 5 112275337 112281126 hybridization