Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3452 ATGGCGCTCTCTCTCTGTCACAGTCCTCTTCCTTTTCCATGTTCTCATTCTTCTCTCAAACCGAAGCTCGCTTTATCTCTCTCTCGCTCTTCTTTCTCACCCACTCTCTCCTTCTCTCCTGCTTCCAATGTCAAGTTCACCACTGCCACACCAAGTGCCTACGTCACAGGCCCCGGCTCGGATCCAATCTTCGCTGAACAGGGTCCAAAGATTGACGGGTCGGGTCAGGATAAACCCAACACCCCACCCAAGGTCATAAGTTGGGGGTTGCTATGGATGCTTCTCATGAAGCACAAGCTGAGGCTGATTCTTTCGCTTGCAACTCTCATTGCTTGCTCCACTTGCACTCTTTCCATGCCCATTTTTTCTGGGCGGTTTTTTGAAGTCCTTATTGGTGTTAGACCAGAGCCATTGTGGAAGTTGCTCAGTCAAATTGGAGTGCTGTATGCAATGGAGCCACTTTTAACCGTTATTTTTGTTGTAAACATGAACACTGTATGGGAGAAAGTTATGTCAACTCTTAGAGCTCAGATCTTTGGCAGAATATTGATTCAAAAGGTTGAATTTTTCGACAAATACAAGGTTGGAGAACTCACTGGTTTGTTAACATCTGATTTGGGTTCCCTTAAAGATATTGTGAGCGAGAATGTCTCAAGGGATCGCGGTTTCAGGGCATTATCTGAGGTCATTGGGACGATATTCATTCTTTTTTCTTTATCCCCTCAGCTAGCCCCACTTCTTGGTATTCTGATGCTCACGGTTTCTGTCTCAGTCGCTGTCTACAAGAGATCGACATTCCCTGTTTTCAAAGCACATGGGTTGGCCCAAGCATCAATAGCTGATTGTGTATCAGAAACATTCTCTGCTATTCGAACAGTAAGATCTTTTGGTGGTGAAAAGCGGCAGATGTTTACATTTGCTAAACAGGGTGAGCTCTCTGTCGGAGCTATGGCATCTTTTATTGGATATACTTTCACTTTAACATTTGCTGTTCAAGGACTGGTTAATACCTTTGGGGATCTTCGAGGAGCTTTTGCGGCCGTTGACAGGATCAACTCTGTTTTATCTGGGGTTCAGGTTGATGATTCTCTTGCCTATGGCTTAGAAAGAGAACTAAGGCAACAGAAAGCAGTGGATGATGAGAAATATAAATTATTCTTCTCTAATAGTTCAACTGAGAAGAACCAAATGCATTACATGTCGGCACTAAAAACATCTAGCAATTTGTTTAGCTTGGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTCTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTACGCGGGTTAAATTTAAAACTAAATTGTGGAGCTGTAACTGCACTGGTAGGTTCTAGTGGCGCAGGCAAAAGTACCATAGTGCAGCTATTGGCTAGATTTTATGAGCCAGCAAGAGGTTGCATAACGGTTGCGGGAGAGGATGTAAGAACATTTGACAAGAGTGAATGGGCCCGGGTTGTCTCTATTGTAAATCAAGAGCCTGTTCTCTTCTCGGTGTCGGTTGGAGAAAATATTGCATATGGTCTTCCAGATGAGAATGTTTCTAAGGAGGATGTCATTAAGGCAGCAAAAGCTGCCAATGCTCATGACTTTATCATCTCACTTCCACAGGGCTATGATACACTTGTCGGTGAGCGTGGAGGCCTATTGAGTGGAGGACAGAGGCAGAGAATCGCCATAGCCCGAGCTATCTTAAAGAATGCTCCAATCCTTATACTAGACGAGGCCACAAGTGCGCTGGATGCTGTCAGCGAGCGGCTGGTACAAGAAGCTCTCAACCATTTGATGAAAGGGAGGACGACACTAGTTATAGCTCATCGATTAAGCACGGTTCAAAATGCTCATCAAATTGCGCTTTGTTCTGAAGGGAGGATCGCAGAACTAGGCACACATTTTGAGCTATTGGCTAAGAAGGGCCAATATGCTTCCCTGGTTAGCACTCAGAGGCTTGCATTTGAATGA 1989 0.4449 MALSLCHSPLPFPCSHSSLKPKLALSLSRSSFSPTLSFSPASNVKFTTATPSAYVTGPGSDPIFAEQGPKIDGSGQDKPNTPPKVISWGLLWMLLMKHKLRLILSLATLIACSTCTLSMPIFSGRFFEVLIGVRPEPLWKLLSQIGVLYAMEPLLTVIFVVNMNTVWEKVMSTLRAQIFGRILIQKVEFFDKYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEVIGTIFILFSLSPQLAPLLGILMLTVSVSVAVYKRSTFPVFKAHGLAQASIADCVSETFSAIRTVRSFGGEKRQMFTFAKQGELSVGAMASFIGYTFTLTFAVQGLVNTFGDLRGAFAAVDRINSVLSGVQVDDSLAYGLERELRQQKAVDDEKYKLFFSNSSTEKNQMHYMSALKTSSNLFSLAWSGDVCLEDVYFSYPLRPDVEILRGLNLKLNCGAVTALVGSSGAGKSTIVQLLARFYEPARGCITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDENVSKEDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARAILKNAPILILDEATSALDAVSERLVQEALNHLMKGRTTLVIAHRLSTVQNAHQIALCSEGRIAELGTHFELLAKKGQYASLVSTQRLAFE* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3452 662 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 308 660 IPR039421 -
Ahy15g3452 662 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 40 309 IPR039421 -
Ahy15g3452 662 SUPERFAMILY ABC transporter transmembrane region 91 356 IPR036640 GO:0005524|GO:0016021
Ahy15g3452 662 Gene3D ABC transporter type 1, transmembrane domain 154 415 IPR036640 GO:0005524|GO:0016021
Ahy15g3452 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 657 IPR027417 -
Ahy15g3452 662 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 103 336 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy15g3452 662 SMART AAA_5 445 639 IPR003593 -
Ahy15g3452 662 CDD ABC_MTABC3_MDL1_MDL2 420 657 - -
Ahy15g3452 662 Pfam ABC transporter transmembrane region 102 303 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy15g3452 662 Gene3D - 416 659 IPR027417 -
Ahy15g3452 662 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 308 660 - -
Ahy15g3452 662 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 40 309 - -
Ahy15g3452 662 Pfam ABC transporter 436 587 IPR003439 GO:0005524
Ahy15g3452 662 ProSitePatterns ABC transporters family signature. 559 573 IPR017871 GO:0005524
Ahy15g3452 662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 418 656 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3452 Ahy-Chr15 157102186 157107722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3452 118 662 Calmodulin-binding Proteins AT2G36910 34.364 8.52e-76 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3452 15 157102186 157107722 Ahy15g3452 15 157102186 157107722 ECH
Ahy15g3452 15 157102186 157107722 Ahy5g3049 5 112064233 112069796 hybridization