Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3439 ATGGGAAAGGATTGGTATTGGTCTAGTAGATCTTCCAAGAGAAGTAGTAGTAGTAGTAGTGCTACAACAACAATATCACAAGCTGAACCACCACCACCACCACCACCTCCTTCCGGTTGCATGTGTGCCGTCTTTCACTTGTTTCATTTCCATCCATTTCATCCCTTCCCTACCACCGCCGCCGTACATCACCAACAAAAGTCATCACCACAAGATCTTCCCCTTCCCCAAGCACCTAGGAATAGCTTGGAAGAATCACACCATCTTTCTACTACACAACCCTCAAATATCATCGAACAAGAACAACACTTCAAAATTCCAAAGAAGATACAAGTGATGAAAACTAGTGAAGTTGACATGTGTTGTTCATCAATGGAATCTCCGGGGACATCAGCAAAGACACCAACATTAGTAGCAAGGTTGATGGGTCTTGATCTTCTACCTCCACCTTCTTCAAACTTGTCATCACCCTCTTGTTCATCTTCATCATGCATTTCCACACCAAATCTGCACCTCTTATCCAAACACAGGAACAGCACTGACTGTGTTATTGTTGATCACTCCTCACCAAGAACAAGATCAGATCTTGACTACTATCACCACAGGCTCTCCCTCCAAATCAACACCAACAACAACAAGGACGAGGATTTGGAGATGATGCGGTTCTCATCATCATCATCATCATCATTACTCTCAAAAAGGAACAACCATTTTGATGACAACCATAATAATAATAATAATGTCTCTAATGGCAGAACAAGTTCTTCTTCTTCATCATCATCACCAAGCCATTTGGCAAGGCAAATTGTAAAGCAAGTTAAGAAGAATGTGATGATGAACAGTGGTAGAAAAGTTGGACAAGACATCACCAACACAATCAAACAAAGAGAACCACAACTTGTTACCCAAATCAAACTTAAAAAGAAACTTTCTTCCAAGCCATCATCACCATCACTTGATAATCATCATGATTCAAACTCATCATCTTTTTCTCCAAGGTTAAGGTTCATAGAAACCAAAAACAACAGCCACAAGCCACCAGCTGCTCCACCATCACCACCACCACCACCACCACCACAACAAGTGGAAGAGCTTCCAAGAGTTTTGATAAGGCCAAAGGAAGAAGGGTCGTTGCAGCAGAATCAGAAATCATCATCATCAGTGGCAAAATGTACTAAGAAGGTGAACAATGAAAAGTTCAGCTCATCATCAAGGCTCAAAAAGCAAGAGGAGCCATTCATAGTTCGACCAACTTCACCACCAACAACTAGAACCGGTGACATCATCATCAAGAATGCCACAAAAACCCATCATAAGAAGACTCATCAATTGTCCAACAATCTTCTCAATAACATCAACACTGTCGTCCCCAACCTTTTCCCTATCAAGACTGAAGCTTCTCCTCCACCAACCAAAATTAATCACAATAAGAAGCAGTCAGAGGTATGTGACAAAAGTAGCCCCCAACAGTTATCTAGTTCTTGGAGCCATCATCACAGTCACAGGTACAAACAAGAAGGGATAATAAGCACACTCGCCACCCGAGATTTCAGCACAAACGACATCGTTCAAGCCAAAAGCACTAACCAGAATAATGCATATTCATCATCATCCACCACTGGAGAAGAACTTGCAGCAGCTGCAGCTGCTGAATCTGAACATCACGGACCAGAATTTCAGTATATCACAGGAATCCTAAGCCGTACTTTCAACAAGGAAGAACAACATGCCACAACAACAGGTCAACGCTTCTTTCATGACCTCGAAGAACACCCAATTTTGAATTCCCATGTTTCCACTCCCGAAAACGTTAAAGATTGCATCTTTTCGATGAAACAAAAACTGGGTCTGCGCTGGAATCGGAGGTTGATGTTTGACTTGGTGGATGAGGTGTTAATGGAGGTTCTTAGGCCTATAAAAAGCGAAGAAAAGAGTAGGCTTTGGTTTTTGCATGGGCGTTGTTGTTGTTATTACCAAGGGACGGTTGAAGGATTAATGGAGAGAGTGTGGAAGAGGATAGGGAAGTTCCCATGCAAGAGGTGTGAGTTTTTGGAGGACATTGATTGGTTGATAGAATCAGAGGACATGGAGAAGGTGAAGGTGGAGGTTGAAGAAGGTTTGGAGGAAGAAGGAGAAAGGTTGGTGGCAGAGATTGAAGGGAACATATGGAACACATTAGTGCATGAATCCCTTATGGTTATGGTCACTGCCTATTAG 2217 0.424 MGKDWYWSSRSSKRSSSSSSATTTISQAEPPPPPPPPSGCMCAVFHLFHFHPFHPFPTTAAVHHQQKSSPQDLPLPQAPRNSLEESHHLSTTQPSNIIEQEQHFKIPKKIQVMKTSEVDMCCSSMESPGTSAKTPTLVARLMGLDLLPPPSSNLSSPSCSSSSCISTPNLHLLSKHRNSTDCVIVDHSSPRTRSDLDYYHHRLSLQINTNNNKDEDLEMMRFSSSSSSSLLSKRNNHFDDNHNNNNNVSNGRTSSSSSSSSPSHLARQIVKQVKKNVMMNSGRKVGQDITNTIKQREPQLVTQIKLKKKLSSKPSSPSLDNHHDSNSSSFSPRLRFIETKNNSHKPPAAPPSPPPPPPPQQVEELPRVLIRPKEEGSLQQNQKSSSSVAKCTKKVNNEKFSSSSRLKKQEEPFIVRPTSPPTTRTGDIIIKNATKTHHKKTHQLSNNLLNNINTVVPNLFPIKTEASPPPTKINHNKKQSEVCDKSSPQQLSSSWSHHHSHRYKQEGIISTLATRDFSTNDIVQAKSTNQNNAYSSSSTTGEELAAAAAAESEHHGPEFQYITGILSRTFNKEEQHATTTGQRFFHDLEEHPILNSHVSTPENVKDCIFSMKQKLGLRWNRRLMFDLVDEVLMEVLRPIKSEEKSRLWFLHGRCCCYYQGTVEGLMERVWKRIGKFPCKRCEFLEDIDWLIESEDMEKVKVEVEEGLEEEGERLVAEIEGNIWNTLVHESLMVMVTAY* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3439 738 MobiDBLite consensus disorder prediction 1 35 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 283 337 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 374 427 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 375 399 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 241 267 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 61 102 - -
Ahy15g3439 738 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 736 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 61 76 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 346 362 - -
Ahy15g3439 738 Pfam Domain of unknown function (DUF4378) 558 729 IPR025486 -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 8 26 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 83 100 - -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 461 503 - -
Ahy15g3439 738 Pfam DUF761-associated sequence motif 123 149 IPR032795 -
Ahy15g3439 738 MobiDBLite consensus disorder prediction 228 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3439 Ahy-Chr15 156955395 156958701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3439 104 730 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 28.571 1.60e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3439 - - aip:107644757 1214.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3439 15 156955395 156958701 Ahy15g3439 15 156955395 156958701 ECH
Ahy15g3439 15 156955395 156958701 Ahy5g3035 5 111891182 111894456 hybridization
Ahy15g3439 15 156955395 156958701 Ahy19g3516 19 157869343 157872331 PCT
Ahy15g3439 15 156955395 156958701 Ahy9g2112 9 109886472 109889305 PCT
Ahy19g3516 19 157869343 157872331 Ahy15g3439 15 156955395 156958701 PCT
Ahy9g2112 9 109886472 109889305 Ahy15g3439 15 156955395 156958701 PCT