Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3430 ATGGGAAAGGGTAAGGAGAAGGAGCTTCATCAGGTAACTATTTGGGGACTAGAAAATAATAATAATTATAACAATAATAATATTAATACTGAAGAAAACAAGAAGTGGATGCATAGAGAGACAGAAAAACAAAGAAGGCAAGAGATGGGGAAGCTTTGTGCTACTCTTAGATCTCTTCTACCTTTAGAATATATTAAGGGAAAGAGGTCAACTTCTGATCACATGTATGAGGCTGTGAATTACATAAACCAGCTTCAGAATAAGGTGAAGAAGTTGCAAGCTAAGAGGGATGAATTAAAGAAGCATTTTTCTGATCTGAACAATAATAATGCAATTCATGATGATGATGAAGATGAAGATGAAAGTATTTTACATCTTCCACCCTATGTTGTTGTTCATCCTTTGCAAGGAGTAGGTGTTGAGATTATTTGCAGTTACAGCTTCAAGAAATGTTTGTGTCCCTTGTCAAGATTGCTACACATTCTTATTGGTGAAGGGCTTAACATAATCAACACTATTTCAACCAAAAAAAATGGGAGATTCATACACACTATCCAATCAGAGGATCCAAATATTAGTAGTAGTGCTGATTACTCTGAGCTGCAAAGAAAGCTTACAGAAGCAATAATATCATCATCTTCAAGTTTGCCAGAAACTTTGATTAGACCTGATGAAAGTTGCTTATTATATCTTGATTCTTGA 702 0.3462 MGKGKEKELHQVTIWGLENNNNYNNNNINTEENKKWMHRETEKQRRQEMGKLCATLRSLLPLEYIKGKRSTSDHMYEAVNYINQLQNKVKKLQAKRDELKKHFSDLNNNNAIHDDDEDEDESILHLPPYVVVHPLQGVGVEIICSYSFKKCLCPLSRLLHILIGEGLNIINTISTKKNGRFIHTIQSEDPNISSSADYSELQRKLTEAIISSSSSLPETLIRPDESCLLYLDS* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3430 233 PANTHER TRANSCRIPTION FACTOR 20 217 - -
Ahy15g3430 233 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 20 217 IPR015660 GO:0003700|GO:0006357
Ahy15g3430 233 SMART finulus 39 91 IPR011598 GO:0046983
Ahy15g3430 233 Gene3D - 24 114 IPR036638 GO:0046983
Ahy15g3430 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 85 IPR011598 GO:0046983
Ahy15g3430 233 Coils Coil 75 109 - -
Ahy15g3430 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 32 105 IPR036638 GO:0046983
Ahy15g3430 233 Pfam Helix-loop-helix DNA-binding domain 35 86 IPR011598 GO:0046983
Ahy15g3430 233 CDD bHLH_AtORG2_like 34 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3430 Ahy-Chr15 156758024 156759622 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3430 34 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 44.253 4.47e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy15g3430 HLH 4.00E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3430 - - ahf:112751692 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3430 15 156758024 156759622 Ahy5g3027 5 111731706 111733423 hybridization
Ahy15g3430 15 156758024 156759622 Ahy19g3508 19 157784947 157786916 PCT
Ahy15g3430 15 156758024 156759622 Ahy9g2124 9 110000800 110002372 PCT
Ahy19g3508 19 157784947 157786916 Ahy15g3430 15 156758024 156759622 PCT
Ahy9g2124 9 110000800 110002372 Ahy15g3430 15 156758024 156759622 PCT