Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3420 ATGGCATTGACTCCACCACCTCATGATGCAACAACAAATCCGTTTCTACTAATAAGATCTATCAGCAGCAGCAATAATGCCATGCTATCTAAAGAAGAAGAAGAAGAAGAGAAGGAGAATAATAAAGGGGAGCCACATACCAATAATTTGTGTGCCGTGATTAATCACTATATCCACACTCTCAATCACTTTAACTTGCGAAACTTGGGCTACCCCCTTAATCAGAATTTCAACTACGATGCATTGGCACCATTGCTAAGATTTCACCTGAACAATGCGGGTGATCCATTTTTAGGAAGCACGGTGTGCCTAAATTCAACATCATTTGAAGTTAGTGTGCTTGATTGGTTTGCAAATTTGTGGGAGATACAAAACAACAAGTACTGGGGATACGTCACCACTGGTGGAACTGAAAGCAATCTTCACGCCATTTTATTAGGGAGAGAAAAATTTCCTGATGGAATTCTATATACTTCACAAGATTCGCATTATTCAATATTCAAAATTGCAAGAATGTACCGAATGCAATGTGTCAAAGTTGGAACTTTGGTCTCCGGTGAAATTGATTGCGCTGAACTAAAAGCTTCATTACTTGCTCACAAGGACCATCCAGCCATCATCAATCTTAACATAGGTACAACAATGAAAGGAGCTGTTGACGACATTGATCTTGTAATACAAACATTGGAGAAAAATGGTTTCAGTCGTGATCGATTCTACATTCACTGTGATGGAGCTCTATTTGGAATCATGCTCCCCTTTCTCAAACAAGCACCAAAGATAAGTTTCAAGAAACCAATCGGAAGTGTGTGTGTTTCTGGACATAAATTCTTAGGATGCCCAATTCCATGTGGAGTTGTAATAACTCGTAAAGAATACATGAATACATTATGTAGAGACATAGAATACATTGGTTCAAGGGATGCAACAATCACAGGTAGCCGATCTGGACATGCTCCAATCTTCCTTTGGTATGCTATCACTAAAAGAGGTTCATTGGGGCTTCAAAAAGAAGCTCAAAGTTGCATAAGGAATGCACGTTACTTACATAATCGATTGCGTGAGGCAAGAATTGGTGCAATGTTAAATGAGTATAGCAACATTGTTGTGTTTGAGAAGCCTCTTGATGATGAATTTAGCCGTAGGTGGAGTTTGGCATGCAAAGGGAACATTGCACACGTCGTGGTCATGCAGCACGTTACCATTGAAATGTTGGATTTGTTTGTTGCTGAGTTTCTTCAAAAACGATCCTTTTGGTGGTTCAAGGATTATGGATCTTCTTTTCAGCCTCGCTGCATTGCAGATGAAATTGGTGCTGCAAATTGTTCTTGCTCAATGCACAGTTTGTTATCGTGA 1356 0.396 MALTPPPHDATTNPFLLIRSISSSNNAMLSKEEEEEEKENNKGEPHTNNLCAVINHYIHTLNHFNLRNLGYPLNQNFNYDALAPLLRFHLNNAGDPFLGSTVCLNSTSFEVSVLDWFANLWEIQNNKYWGYVTTGGTESNLHAILLGREKFPDGILYTSQDSHYSIFKIARMYRMQCVKVGTLVSGEIDCAELKASLLAHKDHPAIINLNIGTTMKGAVDDIDLVIQTLEKNGFSRDRFYIHCDGALFGIMLPFLKQAPKISFKKPIGSVCVSGHKFLGCPIPCGVVITRKEYMNTLCRDIEYIGSRDATITGSRSGHAPIFLWYAITKRGSLGLQKEAQSCIRNARYLHNRLREARIGAMLNEYSNIVVFEKPLDDEFSRRWSLACKGNIAHVVVMQHVTIEMLDLFVAEFLQKRSFWWFKDYGSSFQPRCIADEIGAANCSCSMHSLLS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3420 451 Pfam Pyridoxal-dependent decarboxylase conserved domain 106 361 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy15g3420 451 Gene3D - 87 326 IPR015421 GO:0003824
Ahy15g3420 451 MobiDBLite consensus disorder prediction 27 46 - -
Ahy15g3420 451 Gene3D Aspartate Aminotransferase, domain 1 327 416 IPR015422 GO:0003824
Ahy15g3420 451 PANTHER - 38 447 - -
Ahy15g3420 451 SUPERFAMILY PLP-dependent transferases 65 413 IPR015424 -
Ahy15g3420 451 MobiDBLite consensus disorder prediction 29 44 - -
Ahy15g3420 451 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3420 Ahy-Chr15 156633341 156637063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3420 211 356 Calmodulin-binding Proteins AT5G17330 28.947 6.33e-07 49.7