Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3353 ATGGTGGATAGGGATTCAAGTGAAGCACACATGTCAATAGCCGCTTCTTCCATGTTCCCTGGCTTCAGGTTCTGTCCCACGGACGGTGAATTAATCTCTTATTACCTCAGAAAAAAATTGGACGGTGACGAGGACAGTGTTCAGATTATTTCGGAGCTTGAGCTTTGCACCTTTGAGCCTTGGGATTTGCCTGAAAAATCGTTCATTAAATCAAATGATGAGTGGTTTTTCTTCTCGCGACGGTGGAGAAGGTATCCCAATGGTTCACAGAATAAAAGGGCAACTAAAAGTGGTTATTGGAAGGTCACAGGAAATGAGCGACAGATAGAGTCTGGTCAGAATGTGATTGGTACCAAACGTACTTTGGTATTCCATGTCGGTCGAGCTCCCAAAGGCGAAAGAACTGAATGGATTATTCATGAATACTGTATCAATGACAAATTTCAGGATTCTTTGGTGGTTTGTCGGCTCAAGAGGAACACAAAATTTCGTGCAAATGATGATTCTAACAGAACTTCACGCGAGAGTGGTTGTGGAGTCTCAGAAGGGGTTACAGTTCAAATGAGCACTTGTGTGCCTATTCAAGATAAAGAGGTTGGGTGTAGTTCCAAGAGGAGTAACAATAGTAATAGTTCTCCTTCTATTACTGTCCAAATTAAATCCAGTGATAGAGTTGCCAATGAAGACAATCCCAAAGCTTCTTCCAATGAATCCAGTGATAGAGTTGCCAATGAAGCCAATCCCAAAGATAGAGTTGCCAATGAAGCCAATCCCAAAGCTTCTTCCAATGAATCCAGTGATAGAGTTGCCAACGAAGCCAATCCCAAAGCTTCTTCCAATCACTCTAAGGTGGATGAAGTGGATTATTATGCAGAGATCAACTTAGATGATATCATCAACTTAGATGAACCAGCACTCTAA 921 0.4191 MVDRDSSEAHMSIAASSMFPGFRFCPTDGELISYYLRKKLDGDEDSVQIISELELCTFEPWDLPEKSFIKSNDEWFFFSRRWRRYPNGSQNKRATKSGYWKVTGNERQIESGQNVIGTKRTLVFHVGRAPKGERTEWIIHEYCINDKFQDSLVVCRLKRNTKFRANDDSNRTSRESGCGVSEGVTVQMSTCVPIQDKEVGCSSKRSNNSNSSPSITVQIKSSDRVANEDNPKASSNESSDRVANEANPKDRVANEANPKASSNESSDRVANEANPKASSNHSKVDEVDYYAEINLDDIINLDEPAL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3353 306 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Ahy15g3353 306 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Ahy15g3353 306 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 304 - -
Ahy15g3353 306 MobiDBLite consensus disorder prediction 199 286 - -
Ahy15g3353 306 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 304 - -
Ahy15g3353 306 MobiDBLite consensus disorder prediction 200 242 - -
Ahy15g3353 306 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Ahy15g3353 306 MobiDBLite consensus disorder prediction 256 278 - -
Ahy15g3353 306 Gene3D NAC domain 27 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3353 Ahy-Chr15 155843353 155845284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3353 6 166 NAC Transcription Factor Family AT2G27300 67.081 2.76e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy15g3353 NAM 2.60E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3353 - - aip:107641470 614.379