Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3349 ATGGAGAACAAACAAGATGGTGTAAGCAATGGTGATGGTGATGGGCTACATGACATTGAAAATGAAGGTGTATTGTTGGATGGGAAGGGCGAAATTCGGAGGAATTGGTCGGAGTTTTCGGAAAGGAACATGTCATATGCAGAGCCACTGCTTGTTAAAAGGACTAACACAACCTCCCAGATTGCTATAATTGGTGCCAACCTCAGCCCCATTGAAAGCCTTGATTATGAGATTTTTGAGAATGAAATTTTTAATCAGGATTGGAGGTCCAGGAAGAAAATTCAGATAATCCAGTATGTGATACTTAAGTGGGGATTTGCTCTTATTATTGGATTAGGCACTGGACTAGTTGGCCTCTTCAATAATATTTCAGTTGAGAACATTGCAGGTTTCAAGTTGCTTATGACAACCACTCTCATGACTCAACACAGATATCTTGAGGCTTTTGTAGCATATGCCGGTATCAATGTAGTTTTAGCAGCAGCAGCTGCTGCACTTTGTGCTTTCATTGCTCCAGCAGCAGCAGGCTCTGGTATTCCGGAGGTGAAAGCATATTTGAACGGCGTGGATGCGCATTCTATACTCGCTCCGAGCACTCTTTTTGTAAAGATTTTTGGTTCCATCCTTGGAGTTTCTGCTGGATTTGTGGTAGGCAAAGAAGGACCTATGGTACATACAGGTGCATGCATAGCTAATTTATTGGGGCAAGGAGGATCTCGCAAGTACGGCTTAACTTGGAATTGGCTTAGATATTTCAAGAATGACAGGGACCGGCGAGACATGATTACTTGTGGCGCGGCTGCTGGTGTTGCTGCTGCCTTTCGCGCACCAGTAGGTGGTGTCCTCTTTGCCCTTGAAGAGGCAGCTTCATGGTGGAGGAGTGCTCTTTTGTGGAGGACATTTTTCACCACAGCAGTAGTTGCTATTGTTTTAAGAGCTGCAATTCAGCTTTGCGCCACCGGGAAATGCGGCTTATTCGGAGAAGGTGGTCTGATAATGTATGATGTTGGTTCTTCAAAGGTAACATACAGCGCCGGCGACGTACTAGCAGCAATACTATTGGGAGTCATTGGAGGAGTTCTTGGAAGTGTATATAACTACCTTGTGGATAAGGTTATTCGGACATATAGCATCATCAATGAAAAAGTAGACGAGTCCGGAGAATACAAAAGCTTTCAGTGCAAACCAGGCTACTACAATGATCTTGCTTCACTCTTCCTAAATACCAATGATGATGCTATTAGAAATCTCTTCAGCTCTAGGATAACCAAGGAGTTTCATATTTCAAGCTTGTTCATCTACTTTGGCACTATCTTCTTTCTTGGGATAGCCACTTATGGTATTGCTGTTCCATCAGGCCTCTTCATTCCTGTTATCCTAGCCGGGGCTGCATACGGCCGGCTTGTTGGGAGACTATTCGAACCGATCGTTAAGCTTGACACAGGACTATTTGCACTGCTTGGAGCTGCATCCTTCCTTGGTGGCACAATGAGAATGACTGTGTCCATTTGTGTCATATTGCTTGAGCTCACAAATGACCTCTTATTACTTCCTCTTGTGATGCTGGTTTTATTGATATCGAAATCTGTGGCCGATGGCTTCAACAAGGGTGTCTATGACCAAATTCTGAAGATCAAAGGACTTCCTTATATGGAGTCTCATGCAGAACCTTATATGAGGACTTTGGCTGCGAGAGACGTTGTCTCAGGTCCATTAGTAACCTTCTCCGGCATAGAAAAGGTTGGGAATATACTTCATGCTTTGGAAACTACAGGACACAATGGTTTTCCTGTGATTGATGAACCACCTTTCTCAGATGCAGCAGAGTTGTGTGGACTTGTTCTGAGGTCTCATTTGCTAGTGTTGCTTAAGGGGAAGAACTTCACAAAGGATAGACTGTTCATGGACCGTAGCATCTCGAAACGAATTTCTGCATTGGATTTTGCAAAGGCTGGATCAGGGAAGGGAATGAAACTAGAGGATCTTGATATCAATGAGGAAGAGAAGAACATGTATGTTGATCTTCATCCCATAACTAATGCATCACCGTACACAGTGCTCGAGACAATGTCACTTGCCAAAGCTGCCATTCTCTTCCGCCAACTCGGACTTAGGCACATGTGTGTTGTCCCAAAGAGCCAAGGGAGACCACCGGTTGTTGGGATTCTAACGCGCCACGACTTCATGCCGGAGCATATTTTGGGACTATACCCTGGAATCAATCCTCACAAAGAGGACTGA 2241 0.444 MENKQDGVSNGDGDGLHDIENEGVLLDGKGEIRRNWSEFSERNMSYAEPLLVKRTNTTSQIAIIGANLSPIESLDYEIFENEIFNQDWRSRKKIQIIQYVILKWGFALIIGLGTGLVGLFNNISVENIAGFKLLMTTTLMTQHRYLEAFVAYAGINVVLAAAAAALCAFIAPAAAGSGIPEVKAYLNGVDAHSILAPSTLFVKIFGSILGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYGLTWNWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRAAIQLCATGKCGLFGEGGLIMYDVGSSKVTYSAGDVLAAILLGVIGGVLGSVYNYLVDKVIRTYSIINEKVDESGEYKSFQCKPGYYNDLASLFLNTNDDAIRNLFSSRITKEFHISSLFIYFGTIFFLGIATYGIAVPSGLFIPVILAGAAYGRLVGRLFEPIVKLDTGLFALLGAASFLGGTMRMTVSICVILLELTNDLLLLPLVMLVLLISKSVADGFNKGVYDQILKIKGLPYMESHAEPYMRTLAARDVVSGPLVTFSGIEKVGNILHALETTGHNGFPVIDEPPFSDAAELCGLVLRSHLLVLLKGKNFTKDRLFMDRSISKRISALDFAKAGSGKGMKLEDLDINEEEKNMYVDLHPITNASPYTVLETMSLAKAAILFRQLGLRHMCVVPKSQGRPPVVGILTRHDFMPEHILGLYPGINPHKED* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3349 746 SUPERFAMILY CBS-domain pair 554 729 IPR046342 -
Ahy15g3349 746 SMART cbs_1 571 624 IPR000644 -
Ahy15g3349 746 SMART cbs_1 682 733 IPR000644 -
Ahy15g3349 746 ProSiteProfiles CBS domain profile. 678 745 IPR000644 -
Ahy15g3349 746 MobiDBLite consensus disorder prediction 1 20 - -
Ahy15g3349 746 PRINTS Plant CLC chloride channel signature 288 296 IPR002251 GO:0005247|GO:0006821|GO:0016020
Ahy15g3349 746 PRINTS Plant CLC chloride channel signature 320 327 IPR002251 GO:0005247|GO:0006821|GO:0016020
Ahy15g3349 746 PRINTS Plant CLC chloride channel signature 77 85 IPR002251 GO:0005247|GO:0006821|GO:0016020
Ahy15g3349 746 PRINTS Plant CLC chloride channel signature 302 312 IPR002251 GO:0005247|GO:0006821|GO:0016020
Ahy15g3349 746 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 382 744 - -
Ahy15g3349 746 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 37 382 - -
Ahy15g3349 746 Gene3D Clc chloride channel 94 551 - -
Ahy15g3349 746 PRINTS Chloride channel signature 203 222 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Ahy15g3349 746 PRINTS Chloride channel signature 538 552 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Ahy15g3349 746 PRINTS Chloride channel signature 267 286 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Ahy15g3349 746 PRINTS Chloride channel signature 172 189 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Ahy15g3349 746 PRINTS Chloride channel signature 500 519 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Ahy15g3349 746 PRINTS Chloride channel signature 482 498 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Ahy15g3349 746 PRINTS Chloride channel signature 450 470 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Ahy15g3349 746 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 382 744 - -
Ahy15g3349 746 Pfam Voltage gated chloride channel 160 532 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Ahy15g3349 746 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 37 382 - -
Ahy15g3349 746 Pfam CBS domain 682 728 IPR000644 -
Ahy15g3349 746 Gene3D - 552 734 IPR046342 -
Ahy15g3349 746 CDD CBS_pair_voltage-gated_CLC_euk_bac 564 731 - -
Ahy15g3349 746 SUPERFAMILY Clc chloride channel 81 553 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3349 Ahy-Chr15 155782909 155788728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3349 12 744 Ion Channels AT5G49890 69.755 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3349 K05016 - jre:108982434 1133.24