Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3329 ATGGGTGAGGAGGTGAAAGCAATTGTTCCCGAGTCTCTGCTTAAAAAGCAGAAGAGGGAGGATGAATGGGCCTTAAAGAAAAAGGAGGAGCTTAATGCTGCAAAGAAGAAGAGAGCAGAAAGCCACAAGCTCATTTACAGCAGGGCAAAGCAATATGCAAAGGAATACCAGGAGCAGGAAAAGGAGCTGATCCAATTGAAGCGGGAAGCAAAGCTGAAAGGTGGATTCTATGTTGATCCAGAGGCTAAGCTCCTGTTTATCATCCGCATCCGTGGTATCAATGCCATGGATCCCAAGTCAAGAAAGATCTTGCAGTTGTTGAGGTTGAGACAGGTACTGCTTATAATCATTGAATGTTGA 360 0.4472 MGEEVKAIVPESLLKKQKREDEWALKKKEELNAAKKKRAESHKLIYSRAKQYAKEYQEQEKELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQVLLIIIEC* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3329 119 Gene3D - 84 117 IPR036919 -
Ahy15g3329 119 Coils Coil 49 73 - -
Ahy15g3329 119 Pfam Ribosomal L30 N-terminal domain 9 80 IPR012988 -
Ahy15g3329 119 SUPERFAMILY Ribosomal protein L30p/L7e 84 112 IPR036919 -
Ahy15g3329 119 PANTHER 60S RIBOSOMAL PROTEIN L7 5 113 - -
Ahy15g3329 119 PANTHER 60S RIBOSOMAL PROTEIN L7 5 113 IPR039699 -
Ahy15g3329 119 Pfam Ribosomal protein L30p/L7e 85 112 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3329 Ahy-Chr15 155518491 155519113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3329 4 113 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 79.091 4.39e-57 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3329 K02937 - gmx:100813342 176.022