Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3328 ATGGCAGAAATGGGTGAGGAGGTGAAAGAAATTGTTCCCGAGTCTCTGCTTAAAAAGCAGAAGAGGGAGGAGGAATGGGCCTTGAAGAAAAAGGAGGAGCTTAATGCTGCAAAGAAGAAGAGAGCAGAAAGCCGCAAGCTCATTTACAGCAGGGCAAAGCAATATGCAAAGGAATACCAGGAGCAGGAAAAGGAGCTGATCCAATTGAAGCGGGAAGCAAAGCTGAAAGGTGGATTCTATGTTGATCCAGAGGCTAAGCTCCTGTTTATCATCCGCATCCGTGGTATCAATGCCATGGATCCCAAGTCAAGAAAGATCTTGCAGTTGTTGAGGTTGAGACAGGTACTGCTTATAATCATTGAATGTTGGGCTTATTGTGTTATTTCTTGTGTGGGTGTTATTATGGTTTACTTGGTGTTAGTAGTACAGTTCATGACTGTTGTGTTATAA 450 0.4333 MAEMGEEVKEIVPESLLKKQKREEEWALKKKEELNAAKKKRAESRKLIYSRAKQYAKEYQEQEKELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQVLLIIIECWAYCVISCVGVIMVYLVLVVQFMTVVL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3328 149 Coils Coil 17 37 - -
Ahy15g3328 149 Pfam Ribosomal L30 N-terminal domain 12 83 IPR012988 -
Ahy15g3328 149 SUPERFAMILY Ribosomal protein L30p/L7e 87 115 IPR036919 -
Ahy15g3328 149 PANTHER 60S RIBOSOMAL PROTEIN L7 9 116 IPR039699 -
Ahy15g3328 149 Coils Coil 52 76 - -
Ahy15g3328 149 Pfam Ribosomal protein L30p/L7e 88 115 IPR016082 -
Ahy15g3328 149 Gene3D - 87 120 IPR036919 -
Ahy15g3328 149 PANTHER 60S RIBOSOMAL PROTEIN L7 9 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3328 Ahy-Chr15 155515499 155516173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3328 7 116 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 80.909 1.45e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3328 K02937 - gmx:100813342 155.992