Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3287 ATGTCAATGCTTAGTGCTGGAAACAAAACTGTTTACTTATTTCATCTCTCTGAAAATGCGCATATTCTTGATGGTTGGCATAATGGCAAGTCTTGCAGGCTTCGATGGTGCAACCAGCTCTCCCCACCCGTGGAACATCGGGCCTTCACCCCCGAAGAAGACGACACTATAATCAAAGCTCATGCTCGGTTCGGTAACAAGTGGGCCACCATAGCCCGACTCCTTTCTGGCAAAACCGACAATACCATTAAGAACCACTGGAACTCCACCCTCAAACGCAAGTGCGCCTCCATGGGCCCCATCGACGATCCTCACTTCGCGCAGCCACTCAAACGCTCCATCAGCATTAGCGCCGCCGTACCCGTGTCAACGATGGTGGTGAGGTACTTGTTGCCGACGGTGATGGCGACGACGGAGGTGGCAGGCCGTGGCCCAACTCGTCCATGCCCTTCACCACTTTGA 462 0.5368 MSMLSAGNKTVYLFHLSENAHILDGWHNGKSCRLRWCNQLSPPVEHRAFTPEEDDTIIKAHARFGNKWATIARLLSGKTDNTIKNHWNSTLKRKCASMGPIDDPHFAQPLKRSISISAAVPVSTMVVRYLLPTVMATTEVAGRGPTRPCPSPL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3287 153 Gene3D - 47 112 - -
Ahy15g3287 153 Pfam Myb-like DNA-binding domain 48 90 IPR001005 -
Ahy15g3287 153 SMART sant 45 93 IPR001005 -
Ahy15g3287 153 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 28 125 - -
Ahy15g3287 153 SUPERFAMILY Homeodomain-like 26 95 IPR009057 -
Ahy15g3287 153 CDD SANT 48 91 IPR001005 -
Ahy15g3287 153 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 95 IPR017930 -
Ahy15g3287 153 PANTHER MYB PROTEIN-RELATED 28 125 - -
Ahy15g3287 153 ProSiteProfiles Myb-like domain profile. 41 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3287 Ahy-Chr15 154944379 154947509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3287 27 141 MYB Transcription Factor Family AT4G37260 55.906 3.40e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy15g3287 Myb_DNA-binding 3.40E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3287 K09422 - aip:107641435 322.398