Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3263 ATGGCTGATTGGACTTACGATGTGTTCTTGAGTTTCAGAGGCAAAGATATTCGGCAACGGTTCATTGGCCATCTCTACAAAGCTCTTTGCCGGAGGGGATTCCACACCTTCATTGATGACGTGGAGATCGAGCGAGGAGAGGATATCACACGCTCACTTCTCACTGCAGTTGAAGACTCCATGATTGCAATTCCGGTGTTCTCGGAAAACTATGCAACTTCAAGTTTCTGCTTGGACGAACTGGTTAACATCATGGAGTGTGCCAAGACTAAGGGGCAGATTGTTTTGCCGGTGTTCTATGACGTGGATCCTTCCGATGTGCGAAATCTGAGGGGGAGTTTTGGTGAAGCAATGGAGAAACATGAGGAGAGGATGAACCTCGAGGAAGATAAAGAGAGGTTGGAGAAATGGAAGATGGCTTTTATGCAAGCTGCTAATCTTTCTGGATTTCATTTTAAACTTGGGGCCGAAGCTGAATGCGAGTTTACTGAGAAGATTGTGAAAATAGTCTCCAAATGGATTCATCACACTTGTTTATATGTTTCAGATCAAGTAGTTGGACTAGAATCTCAGATTCCAGAACTGAACTTACTTTTGGATGTTGAATCCAGTGACAGAGTCCACATGGTAGGGATTCATGGCATTGGCGGAATAGGTAAAACAACTCTTGCTCGCGCCGTCTACAATTCCATTGCTGACTCATTTGAAGGTGTATGTTTTCTTGGTAATGTGAGAGAAAATTCAATAACACATGGCTTAGTATATCTCCAACAAATGCTGCTTTCAAAGTTAGTTGGTGATGAAAGAGATGTTAAGTTAGGTGATGTCAGTGAAGGAAAGAAGGTGATAGAGCGTAGGCTCAATCGAAAGAAGGTTCTGTTGATTGTTGATGATGTCGATAGATTAGAGCAGTTAAAAGCAGTTGCAGGGGACTCTGTTTGGTTTGGTTCTGGTAGTAGAATCATTGTAACAACTCGAAACAAAGGCTTGTTAACGAGTCATGGAATTGTAAGAACATATGAAGTAGGGAAGTTAAATGATAAAGAAGCTCTTGATTTACTTAGATGGAATGTTTTCAAAACAAGAGAGGTTGATCCAAGTTACTCATACATTTTGAACAGAACGGTTGCTTTTGCTTCTGGCTTGCCACTTGCATTGGAAGTAATAGGGGCTAATTTGTTTGGTAAGAGTAAAGATGAGTGGGAATCTGCTTTGGATCAGTATAAAAGAAGTCCTAAGAGAGAGATTCAAGAGATTCTTAAAGTGAGTTTTGATGGATTGGAGGAGGAAGAGAAGAAGATCTTTCTTGACATTGCTTGTTTCTTTAATGGATATAGATCCAAGTATGTTGAGGAGATACTGCGTGCTCATCACGGCTTTTGCCCCAAGAACAGCATGCGAGTTTTGATTGATAAGTCTTTGGTGAAGATTGAAGATGATAAAGTGATGTTACATGATTTGATTCAAGATATGGGTAGAGAAATTGTCCGACAAGAATCGGAAGAGCCTCGAGGGCGTAGCAGGATTTGGAACTTTGAGGATGCAAAACGTGTTTTGGAACAAGACAAGGGTAGCCATAAAATTGAAATGATAAAGCTAGCATTCCCCAAAGCTGATGAAAAACTTAATTGGGATGGTGTAGCATTCATGAAGATGAATAATCTCAGAACAATTGTTATTAATAAAGGTGACTTTTCAGACAGTCCCAAACATCTTCCAAATAGTTTGAAAGTGCTTAAATGGCGAGGATATCCTTCACAAATTTTCCCATTTGATTTTTATCCAAAGGAAATAGCCATATTGTGGTTACCAGATAGTTCCATATCATCACTCATTAGTTTCTTTCAGAAGCAAAAGGCAAGT 1863 0.4004 MADWTYDVFLSFRGKDIRQRFIGHLYKALCRRGFHTFIDDVEIERGEDITRSLLTAVEDSMIAIPVFSENYATSSFCLDELVNIMECAKTKGQIVLPVFYDVDPSDVRNLRGSFGEAMEKHEERMNLEEDKERLEKWKMAFMQAANLSGFHFKLGAEAECEFTEKIVKIVSKWIHHTCLYVSDQVVGLESQIPELNLLLDVESSDRVHMVGIHGIGGIGKTTLARAVYNSIADSFEGVCFLGNVRENSITHGLVYLQQMLLSKLVGDERDVKLGDVSEGKKVIERRLNRKKVLLIVDDVDRLEQLKAVAGDSVWFGSGSRIIVTTRNKGLLTSHGIVRTYEVGKLNDKEALDLLRWNVFKTREVDPSYSYILNRTVAFASGLPLALEVIGANLFGKSKDEWESALDQYKRSPKREIQEILKVSFDGLEEEEKKIFLDIACFFNGYRSKYVEEILRAHHGFCPKNSMRVLIDKSLVKIEDDKVMLHDLIQDMGREIVRQESEEPRGRSRIWNFEDAKRVLEQDKGSHKIEMIKLAFPKADEKLNWDGVAFMKMNNLRTIVINKGDFSDSPKHLPNSLKVLKWRGYPSQIFPFDFYPKEIAILWLPDSSISSLISFFQKQKAS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3263 621 Gene3D - 344 428 IPR042197 -
Ahy15g3263 621 Pfam NB-ARC domain 205 418 IPR002182 GO:0043531
Ahy15g3263 621 PRINTS Disease resistance protein signature 286 300 - -
Ahy15g3263 621 PRINTS Disease resistance protein signature 209 224 - -
Ahy15g3263 621 PRINTS Disease resistance protein signature 379 393 - -
Ahy15g3263 621 Gene3D - 2 173 IPR035897 -
Ahy15g3263 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 438 IPR027417 -
Ahy15g3263 621 Pfam TIR domain 6 176 IPR000157 GO:0007165
Ahy15g3263 621 SUPERFAMILY "Winged helix" DNA-binding domain 415 519 IPR036390 -
Ahy15g3263 621 SMART AAA_5 206 347 IPR003593 -
Ahy15g3263 621 Gene3D - 174 337 IPR027417 -
Ahy15g3263 621 ProSiteProfiles TIR domain profile. 4 174 IPR000157 GO:0007165
Ahy15g3263 621 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 611 IPR044974 GO:0006952
Ahy15g3263 621 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Ahy15g3263 621 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 10 611 - -
Ahy15g3263 621 SMART till_3 5 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3263 Ahy-Chr15 154743460 154746661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3263 6 611 WRKY Transcription Factor Family AT4G12020 30.695 1.05e-62 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3263 - - ahf:114925390 1227.62