Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3255 ATGTCAGCTCCATCACTCACCCCTTCCTCTTCTTTTGGCTATGCATTCACCTATGATGTGTTTATCAGCTTTAGAGGCACTGATACTCGTTATGGTTTCACTGGTAATCTCTACCAAGCTCTCTATAGGAAGGGAATCCACACTTTCTTTGATGATAAGGAGCTCTGGAAAGGAGAGGGGATCACACCCTCACTTCTCAAGGCAATTGAAGAATCTAGAATCGCCATTGTTGTGTTCTCCAAGAACTATGCATCTTCTTCCTTTTGCTTAGTTGAACTTGTCAAGATCATGGAGTGCATTAAGGGGAAGGGCCGGTGGGTCTTTCCGGTCTTTTATGATGTTGATCCTAGTGACGTGCGACACCAAAAAGGAAGCTATAGAGAAGCGTTGACTAAGCATGAGGAGAGGTTCAAGGATGACATGGAGAAACTCGAGAAAGTGCAGAAATGGAGGGCAGCTCTGCATCAAGCGGCTAACCTGTCTGGCAATGATTTCAAGCTTGAAAGGGAATATGAACATGCTTTTATTGAGAAGATCGTGAAGGAGATCTCAAACAGGATAGCTCGTGTTCCTTTGCATGTTGCTGATTACCCTGTTGGACTGGAATCTCGAGTACTAAAAGTAAACAGTCTTCTAAATGGTGGATCTAATAGAGGAGCCCATATGCTAGGGATATATGGAGTTGGTGGAATAGGTAAAACAACTATTGCTAAAGCAGTTTATAACTTGATCGCTGACCAATTTGAAGGTTTGTGTTTTCTTGAAAATGTTAGAGAAAAATCAATTAAACATGATTTAGCATATCTCCAGGAGATGGTTCTTTGTAAAATTCTTGGAGAGAAAGCTATACAGCTAACAAGTGTAAGTGAAGGAATTTCATTAATAAAGCAAAGGTTCAAGAGAAAGAAGGTTCTCTTGGTTCTTGATGACGTACACAAACTTGAGCAATTGCAGGCAATTGCTGGAAGTCCCAATTGGTTTGATTCTGGCAGCATAATCATCATAACAACTCGGGACAAACATTTGTTGGCAAGTCATATGGTGGAGAGAACATACCAAGTGAAGGAATATGATAGAAAAGAAGCACTTGAGTTGTTTATGTGGAATGCTTTCAAATGCGATAATGTTGATCCAAGCTATGTGGACATTTCAAATAAAGTAGTGTCCTATGCTTCTGGCCTTCCATTGGCTCTAGTGGTAATAGGGTCAAATTTGTATGGAAAAAGTGTACAAGAATGGATATCTGCATTAGAGGAGTACAAAAAAATTCCTAATGAAGATATCCAAAGCAAACTTAAAGTAAGCTTTGATGCTTTGAGTGAATATCATAAAAATATTTTTCTTGACATTGCTTGTTGCTTCAAAGGATATCATTTGGAAGAGGTTGAAAACATTCTCCATGCTCATCATGATGTTAGCCCGAAACTTGGCATTAGTGTGTTGGTTGAAAAATGTCTAATAAATATTGATATGAATGGCTATGTCACACAACATGACTTAATTCAAGATATGGGCCAAGAAATTGTTCGTCAAGAATCACCTAAAGATCCTGGAAAACGTAGCAGGTTATGGCTTCCTGAAGATGTTATCCAAGTTTTACAAGAGAACACTGTAAGTAAATCTATGTGGGCAGTTTGA 1638 0.3907 MSAPSLTPSSSFGYAFTYDVFISFRGTDTRYGFTGNLYQALYRKGIHTFFDDKELWKGEGITPSLLKAIEESRIAIVVFSKNYASSSFCLVELVKIMECIKGKGRWVFPVFYDVDPSDVRHQKGSYREALTKHEERFKDDMEKLEKVQKWRAALHQAANLSGNDFKLEREYEHAFIEKIVKEISNRIARVPLHVADYPVGLESRVLKVNSLLNGGSNRGAHMLGIYGVGGIGKTTIAKAVYNLIADQFEGLCFLENVREKSIKHDLAYLQEMVLCKILGEKAIQLTSVSEGISLIKQRFKRKKVLLVLDDVHKLEQLQAIAGSPNWFDSGSIIIITTRDKHLLASHMVERTYQVKEYDRKEALELFMWNAFKCDNVDPSYVDISNKVVSYASGLPLALVVIGSNLYGKSVQEWISALEEYKKIPNEDIQSKLKVSFDALSEYHKNIFLDIACCFKGYHLEEVENILHAHHDVSPKLGISVLVEKCLINIDMNGYVTQHDLIQDMGQEIVRQESPKDPGKRSRLWLPEDVIQVLQENTVSKSMWAV* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3255 545 SMART till_3 17 160 IPR000157 GO:0007165
Ahy15g3255 545 Pfam NB-ARC domain 205 438 IPR002182 GO:0043531
Ahy15g3255 545 Gene3D - 190 355 IPR027417 -
Ahy15g3255 545 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 20 536 - -
Ahy15g3255 545 SMART AAA_5 219 361 IPR003593 -
Ahy15g3255 545 CDD AAA 216 339 - -
Ahy15g3255 545 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 162 IPR035897 -
Ahy15g3255 545 Pfam TIR domain 18 186 IPR000157 GO:0007165
Ahy15g3255 545 Gene3D - 357 440 IPR042197 -
Ahy15g3255 545 Coils Coil 127 147 - -
Ahy15g3255 545 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 450 IPR027417 -
Ahy15g3255 545 ProSiteProfiles TIR domain profile. 16 187 IPR000157 GO:0007165
Ahy15g3255 545 SUPERFAMILY "Winged helix" DNA-binding domain 427 534 IPR036390 -
Ahy15g3255 545 Gene3D - 14 189 IPR035897 -
Ahy15g3255 545 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 536 IPR044974 GO:0006952
Ahy15g3255 545 PRINTS Disease resistance protein signature 298 312 - -
Ahy15g3255 545 PRINTS Disease resistance protein signature 391 405 - -
Ahy15g3255 545 PRINTS Disease resistance protein signature 222 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3255 Ahy-Chr15 154672154 154674158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3255 199 535 WRKY Transcription Factor Family AT5G45050 36.471 1.21e-51 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3255 - - ahf:112801816 836.254