Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3251 ATGGCAAATCAAGATTCTTCTTCCACTTCTTGCTCAAACCATGGTTGGACATATGATGTCTTTGTGAGCTTCCACGGGAAAGACACGCGTCGCAACTTCACCGGCTACCTTGCCGATGCCTTGGACAGAAAGGGAATCCACATTTTCAGAGATGACATAAGGCTGAAGAAAGGAGAAGGGATTCCATATGCACTAGTCAAAGCAATTGAAGAGTCTAGAATTGCTGTGGTTGTTTTCTCAGAAAACTATGCATCCTCAAGTTGGTGTCTTGATGAGTTGGTTGAGATCATGGGGTGCATGAAAAAGAAGGGACAGTTGGTGATTCCAATTTTCTACTTTGTTGATGCTTCTGTGGTAAGGCATCAAAGGGAGAGTTTTGGAAGGTCAATGGAAAAGCATGAAGAAAGGCATGGCAAAGAGACAGTAAGTAAGTGGAGGATTGCATTGAAAGAAGCAGCCAATTTGTCAGGATGGAGTTTCAAAAATGGGTATGAGTATAAGTTTATTCAAGAGATTACTGAGAAAATATCAAGCATACTAAACATTACCTCCTTACACATTGCTGATCACCCAGTTGGATTAAACTATAGAGTGTCAAAAGTGTTGAGGCTCCTAGCACCAAATTCTAATGATATCAAAATGGTTGGAATCTATGGTATTGGTGGAATTGGCAAAACAACCATTGCTAGAGCTGTGTACAACTCAATTTCTAGCAGGTTTGAAGGGTCAAGCTTTCTTGCTGATGTGAGAGAAAATACAGTGAAACATGGTTTGGTCCAACTACAAGAGACTCTTCTCCATAATTTTCTTGGAGAAAACATCAAGTTGGGTGATGTGAACAGAGGAATTCCCATAATAAAGAGAAGGCTTTGCACCAAGAAGGTTCTTCTGATTCTTGATGACGTCGACAACCTGCGACAACTGAGGTCATTGGCTGGCAGCCATGATTGGTTTGGTTCCGGAAGTAGGATCATCATAACAACAAGGGACAAACATTTGCTAACTGCTCATGGGGTTGAAAATGGAAACATATATGAAATGAAACAGTTGAATGATCATGAATCTCTTGAGCTATTTAGTTTAAATGCTTTTAGAAGAAAGCAACCAAAGGAAAATTATGTCAACATTGCGAACCGCATGGTTCAATATGCCAAAGGCCTTCCACTGGCTTTGAATGTGATTGGTTCTGATCTGTTTGGCAAAACAATTGAAGAATGGGAAAGTGCATTGAAGAAATATGAAAGAATTCCAAGCAGAGAGATCTTAGATGTGCTCAGAGTAAGCTATGATAATTTGGATGATAATGAGAAGGAAATTTTCCTTGACATTGCATGTTTCTTCAAGGGAAACTTTAGACAGGATGTGGAAAAGACACTAGTGGCCTCACGTTTCTTTCCAGAATATGGCATTGGAGTACTTATTGACAAATCTCTAGTAACTATTAGTGATGCCAACACAATTAAGATGCATGATCTTATACAAGACCTTGGAAGAGACATTGCTAGAAAGGATTCGCCATTCGATCCGGGGAAACGTAGAAGACTATGGCACTGTGATGATGTTCTTGAGGTCCTGACAAAAAACACAGGAACTGATGCAATTGAAGGCATAATGCTGGACATGACCAACCTAAAACAAAAGGTTCCATTAAATTCCAACACCTTTGAGAATATGAAAAGACTTAGGATTCTCATAGTTCGGAATGCACAAGTTTCTGGAGCCCCCAATCATCTGCCAAATAATTTGAGATTGCTTGATTGGGATGAATATCCTTTACCTTCTTTGCCAGCTGATTTTCATCCAGAGACACTTGTTGTACTCAACTTGCCCCATAGTATTCTCACAATGGATGAGCCATTCAAGGCATGTTCATGA 1875 0.3995 MANQDSSSTSCSNHGWTYDVFVSFHGKDTRRNFTGYLADALDRKGIHIFRDDIRLKKGEGIPYALVKAIEESRIAVVVFSENYASSSWCLDELVEIMGCMKKKGQLVIPIFYFVDASVVRHQRESFGRSMEKHEERHGKETVSKWRIALKEAANLSGWSFKNGYEYKFIQEITEKISSILNITSLHIADHPVGLNYRVSKVLRLLAPNSNDIKMVGIYGIGGIGKTTIARAVYNSISSRFEGSSFLADVRENTVKHGLVQLQETLLHNFLGENIKLGDVNRGIPIIKRRLCTKKVLLILDDVDNLRQLRSLAGSHDWFGSGSRIIITTRDKHLLTAHGVENGNIYEMKQLNDHESLELFSLNAFRRKQPKENYVNIANRMVQYAKGLPLALNVIGSDLFGKTIEEWESALKKYERIPSREILDVLRVSYDNLDDNEKEIFLDIACFFKGNFRQDVEKTLVASRFFPEYGIGVLIDKSLVTISDANTIKMHDLIQDLGRDIARKDSPFDPGKRRRLWHCDDVLEVLTKNTGTDAIEGIMLDMTNLKQKVPLNSNTFENMKRLRILIVRNAQVSGAPNHLPNNLRLLDWDEYPLPSLPADFHPETLVVLNLPHSILTMDEPFKACS* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3251 624 Pfam TIR domain 18 181 IPR000157 GO:0007165
Ahy15g3251 624 SUPERFAMILY "Winged helix" DNA-binding domain 420 525 IPR036390 -
Ahy15g3251 624 SMART till_3 17 155 IPR000157 GO:0007165
Ahy15g3251 624 ProSiteProfiles TIR domain profile. 16 180 IPR000157 GO:0007165
Ahy15g3251 624 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 620 - -
Ahy15g3251 624 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 620 IPR044974 GO:0006952
Ahy15g3251 624 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Ahy15g3251 624 Pfam NB-ARC domain 196 416 IPR002182 GO:0043531
Ahy15g3251 624 SUPERFAMILY L domain-like 550 616 - -
Ahy15g3251 624 Gene3D - 349 433 IPR042197 -
Ahy15g3251 624 Gene3D - 14 182 IPR035897 -
Ahy15g3251 624 PRINTS Disease resistance protein signature 214 229 - -
Ahy15g3251 624 PRINTS Disease resistance protein signature 384 398 - -
Ahy15g3251 624 PRINTS Disease resistance protein signature 289 303 - -
Ahy15g3251 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 443 IPR027417 -
Ahy15g3251 624 Gene3D - 183 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3251 Ahy-Chr15 154605415 154608699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3251 18 613 WRKY Transcription Factor Family AT4G12020 31.743 4.90e-83 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3251 - - ahf:114925389 1239.56